Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq310 93.3 3e-14 >seq310 Length=2395884 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 |||||||| |||||||| |||| ||| | |||||||| ||||| ||||| ||||| | | Sbjct 1997430 CCGCCTCTCAACCGCAAAACCAGATGAAGCGTCGACTCCTTTTGGATATTATAATCTG-C 1997372 Query 33203 AAATTGAGTTGG-TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || || | ||||| || ||| || |||||||||||||| | || Sbjct 1997371 AAGTGTCCTCCCATCTTCGAGCTGCTTACCTGCAAAGATCAAACGTTGCTGGTCTGGAGG 1997312 Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || ||||| || || || ||||| || || | | |||||||| || Sbjct 1997311 AATACCTTCCTTGTCTTGAATTTTCGCC---TTCACATTGTCGATCGTGTCTGAACTTTC 1997255 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 ||| ||||| || || |||||||| || | ||| || || ||||| |||||| Sbjct 1997254 AACCTCCAGTGTAATGGTTTTTCCGGTCAAAGTCTTGACAAAAATCTGCATG 1997203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318769006154376