Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq385 203 9e-48 seq1832 91.5 4e-14 >seq385 Length=2344269 Score = 203 bits (224), Expect = 9e-48 Identities = 235/317 (74%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 19836 ATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTG 19895 ||| | || || ||||| |||||||| || || || ||| ||||||||| || ||| Sbjct 1147316 ATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTG 1147375 Query 19896 GTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAG 19955 || ||||| | |||| |||||| || || ||| ||| || | || || | Sbjct 1147376 GTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGA 1147435 Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 || || ||||| ||||| || ||||||||||| || || || || || ||||| ||||| Sbjct 1147436 TTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTG 1147495 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || ||||||||| |||||| ||||||||||| ||||||||||| || ||| ||| Sbjct 1147496 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTGCTTGG 1147555 Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135 || || || || || ||| | || | | || ||| ||||||||||||| ||||| ||| Sbjct 1147556 CCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACCTAAAT 1147615 Query 20136 GGTTTTAACTTTAACCA 20152 |||||||| || ||||| Sbjct 1147616 GGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 91.5 bits (100), Expect = 4e-14 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 19404 GCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGA 19463 || || || |||||||| ||| | || ||||| ||| || || || | |||||| Sbjct 934707 GCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCTACTTTACGGA 934648 Query 19464 AACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAA-TAGGACTGCACTTTTA 19522 ||||||||||| || || || | ||||| | || |||| || ||||||| ||| Sbjct 934647 AACAATATTATCTCAGGTGCTATTGTTCCTACTTC---TGCAGGTATCGCTGCACTCTTA 934591 Query 19523 TCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACT 19582 || || |||||||| | | ||||| ||||||||||| || ||||| ||| |||| Sbjct 934590 CCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCCTTATGAACT 934531 Query 19583 TGTTGTCTTCCACTTCTTAATAGGAGTA 19610 |||| | ||||| ||| | || ||| Sbjct 934530 AATTGTTCTACACTTTTTACTTGGTGTA 934503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144437805880272