Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq310 84.2 2e-11 seq2167 82.4 6e-11 >seq310 Length=2395884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| |||||||| || |||| || || || || || |||| |||| Sbjct 1997432 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACTATCACTTTGGAGGTGGAAAGTTCT 1997491 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111305 ||| | ||| | | || || ||||| || |||||||| | |||| | ||||| Sbjct 1997492 GATACGATTGACAATGTCAAGGCGAAAATCCAGGATAAAGAAGG-GATCCCACCTGATCA 1997550 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| |||||||| | ||| ||||| || | |||||| | || | || |||||||| Sbjct 1997551 ACAGAGGCTTATCTTTGCAGGCAAGCAGCTAGAAGATGGTCGTACACTTGCGGATTATAA 1997610 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || || ||||| || || || | ||| | ||||| || ||||| Sbjct 1997611 TATCCAGAAGGAATCCACCCTTCACCTTGTGCTTCGTCTTCGTGGTGG 1997658 >seq2167 Length=1051226 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTC-GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGA 111338 ||||||||||| | |||| | || || ||||| || || | ||| || || ||| | || Sbjct 204349 GACAAAGAAGG-GATCCCTCCAGACCAGCAAAGACTGATCTTTGCCGGAAAGCAACTTGA 204291 Query 111339 AGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398 |||| || ||| |||| ||||| || || ||||| ||||| || || ||| | ||||| Sbjct 204290 AGATGGTAGAACATTGGCGGATTACAACATTCAAAAGGAATCAACTCTCCATCTTGTGTT 204231 Query 111399 GCGTCTGCGCGGTGGCA 111415 ||| || | ||||||| Sbjct 204230 GCGGTTGAGGGGTGGCA 204214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423028595370400