Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq504 116 4e-21 >seq504 Length=2204878 Score = 116 bits (128), Expect = 4e-21 Identities = 370/564 (66%), Gaps = 11/564 (2%) Strand=Plus/Plus Query 125759 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 125818 || || ||||||| |||||| ||||||||||| || || | |||||| || |||||| Sbjct 1297272 TATTCTCCAACCCTCTTCTCAAAGAAGTTTGTTTTACCTTGCAAGCTAATCAGCTCCATC 1297331 Query 125819 AAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC--CCCAATCTGTTTGAGGAGAC 125876 |||||||||| |||| || | || || ||| |||||| || || | | Sbjct 1297332 CAATCAAATGGATTCTGCACATTGTACATC-TTCCCACATCCCAATGCATTC-AGCAATC 1297389 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 ||| | || | |||||||||| |||| | || |||||| || | | | Sbjct 1297390 TATCTGCTACAAATTCAATGTACTGGCTCATCATTTCTCCGTTCATCCCCACCAACGCGC 1297449 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || |||||||| | | ||| || | || |||||||| || | | ||| || | | Sbjct 1297450 ACGGCAGCGCGTCACACACAAACTCCCTTTCTATTTCCACCGCGTTCGCCACTATCCCCT 1297509 Query 125997 GAATGGTGTCCACCC-CAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACTC 126054 | | ||| | | ||| | || | || || | | || |||| ||| || Sbjct 1297510 TCACTTTCTCCTCGCTCAGCTTCATCTTCAACAGACT-GTACAGCAGGCACGCGAAA-TC 1297567 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 ||| | ||||||||| || || || | || |||||||| || || ||||| || Sbjct 1297568 GCAGTGCAAACCCTCGTCGCGAGAAATTAACTCGTTCGAGAAAGTCAACCCCGGCATCAG 1297627 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||||||||||||| |||||| || || || || || |||||||| ||||||||||| Sbjct 1297628 CCCCCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAATATTCCCTCCAC 1297687 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCAT 126234 || ||||| || | | ||||| || || || || ||||| ||| | Sbjct 1297688 GCAGGCGAAGGCGACAATTCGCTCTGCGAATGATTCGGA---GCCGTCAATCCAGCGGAG 1297744 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 126294 |||||| | ||||| |||| || || ||||| || | ||| || ||||| | || Sbjct 1297745 CGCCCAATTGGCCTTCTTCTGGACGCAGGGGACAGTTTCGATTGCGCGGAAGAGGTGGTT 1297804 Query 126295 CTTTTCTGATGGATCTTTGATGTA 126318 ||| || || | || |||||||| Sbjct 1297805 CTTCTCCGACGAGTCCTTGATGTA 1297828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597337083172960