Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq504 104 3e-17 >seq504 Length=2204878 Score = 104 bits (114), Expect = 3e-17 Identities = 180/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | ||||||||| || || || | || |||||||| || || ||||| || || Sbjct 1297571 GTGCAAACCCTCGTCGCGAGAAATTAACTCGTTCGAGAAAGTCAACCCCGGCATCAGCCC 1297630 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||||||||| |||||| || || || || || |||||||| || |||||||| || Sbjct 1297631 CCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAATATTCCCTCCACGCA 1297690 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 ||||| || | | ||||| || || || ||| |||| ||| | ||| Sbjct 1297691 GGCGAAGGCGACAATTCGCTCTGCGAATGATTCGGA---GCCGTCAATCCAGCGGAGCGC 1297747 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 127770 ||| | ||||| |||| || || ||||| || | ||| || ||||| | ||||| Sbjct 1297748 CCAATTGGCCTTCTTCTGGACGCAGGGGACAGTTTCGATTGCGCGGAAGAGGTGGTTCTT 1297807 Query 127771 TTCTGATGGATCTTTGATGTA 127791 || || | || |||||||| Sbjct 1297808 CTCCGACGAGTCCTTGATGTA 1297828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613490236525920