Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq370 107 2e-18 seq422 95.1 2e-14 seq2203 93.3 5e-14 >seq370 Length=494299 Score = 107 bits (118), Expect = 2e-18 Identities = 230/336 (68%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAA 15975 |||||| ||||| | || || || || || || |||| |||||| || ||| | |||| Sbjct 303544 ATCAAGAATATCGGCTCGGTTAGTAGCTGCAATTACAATAATACCCGTGTTCCCT-TCAA 303602 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 | ||||||||||| || || |||||||| | || || |||| ||| || || | Sbjct 303603 AGCCATCCATCTCAGTTAAGAGCTGGTTCAACGTCTGCTCCCTTTCGTCGTTTCCACCAC 303662 Query 16036 TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095 | ||||| | | ||| | ||||| |||||||| ||||| | || || || || | Sbjct 303663 CAATACCAGTCCCTCTCTGCCTCCCCACAGCATCAATTTCATCCACAAACACAATACAAG 303722 Query 16096 GTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACA 16154 | ||| || | | ||| ||| ||||| || || | | || || || || ||| Sbjct 303723 GAGCATTCTCCTTTGCCTTCTTGAAA-AGATCACGAACCCTCGAAGCACCGACTCCGACA 303781 Query 16155 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 16213 |||||||| ||||| | | ||||| || | || || || ||| || ||| ||||| Sbjct 303782 AACATCTCAACAAACTCCGAACCGGAA-ATCGAGAAAAACGGAACACCAGCTTCGCCCGC 303840 Query 16214 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||| ||| || | ||| ||||| || |||||||| Sbjct 303841 AATAGCTTTAGCCAAAAGGGTCTTTCCGGTACCTGG 303876 >seq422 Length=4557820 Score = 95.1 bits (104), Expect = 2e-14 Identities = 217/320 (68%), Gaps = 10/320 (3%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| |||||||| || ||||| ||||| ||||| || || || |||||||||||| | Sbjct 4441801 AAACCCATCCATTTCAGTCAAGAGCTGATTAATCGTCTGCTCTCGTTCATCATTCCCACC 4441742 Query 16034 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | ||| || | | ||| | ||||| |||||||||||||||||||| || ||||| Sbjct 4441741 CCCCATACCCGCCCCCCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATGCA 4441682 Query 16094 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACAC 16149 || ||||| | || || || | ||||| ||| || | || || |||| Sbjct 4441681 AGG--CGCCTTCGCCTTGGCCTTCTCGAACAAATCCC--TCACCCTAGAAGCACCTACAC 4441626 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 16209 ||||||| | ||| ||||| | | ||||| || || || || || || |||| Sbjct 4441625 CAACAAAAAGCTCAACAAATTCCGAAGCGGAGCACGAGAAAAACGGCACCCCAGCCTCAC 4441566 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 16269 | || | || | ||| | || ||||| || || || ||| ||| | | || |||| Sbjct 4441565 CAGCCACCGCCCTGGCCAACAGCGTCTTCCCGGTTCCCGGCGGGCCCACCA-GAAGGCAT 4441507 Query 16270 CTCGT-GGAATCTTGGCGCC 16288 | | | |||||||| || || Sbjct 4441506 CCCTTCGGAATCTTCGCACC 4441487 >seq2203 Length=1028949 Score = 93.3 bits (102), Expect = 5e-14 Identities = 214/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTG- 16032 ||| || ||||| || ||||| ||||| ||||| || || || | ||||||||| || Sbjct 668709 AAACCCGTCCATTTCAGTCAAGAGCTGATTAATCGTCTGCTCTCTCTCATCATTCCCTCC 668768 Query 16033 GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 || | | || || | | ||| | ||||| ||||||||||||||||| || || |||| Sbjct 668769 GCCCATC-CCGGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATAAACACAATGC 668827 Query 16093 ATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 | || |||||| | || || || ||||||| || | | || || ||||| Sbjct 668828 AAGG--AGCTTTCGCCTTTGCCTTCTCGAACAGATCCCTCACTCTCGAAGCTCCAACACC 668885 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 ||||| | ||||||||| | | || | ||| | ||| || ||| || ||| || Sbjct 668886 TACAAAAAGCTCCACAAATTCCGACGCCGCACAGGAAAAGAACGGTACACCAGCTTCGCC 668945 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 | || || | || || || || || || ||||| || ||| | |||||| || Sbjct 668946 GGAAACCGCCCTCGCCAGGAGGGTTTTTCCTGTACCAGGTGGGCCCACCAGGAGGCAGCC 669005 Query 16271 TCGTGGAATCTTGGCGCC 16288 | || ||||| ||||| Sbjct 669006 TTTCGGGATCTTCGCGCC 669023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620725236472640