Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02]
2,212 sequences; 322,166,964 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq504 111 2e-19
seq370 82.4 9e-11
>seq504
Length=2204878
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 119553 CCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAG 119612
|| ||||| || || | ||||| ||||| |||||||| || || ||||| || |||||
Sbjct 1297617 CCCGGCATCAGCCCCCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAAT 1297676
Query 119613 ATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAAC 119672
|| |||||||| |||||||| |||| | ||||| || || | | || ||| | |
Sbjct 1297677 ATTCCCTCCACGCAGGCGAAGGCGACAATTCGCTCTGCGAATGATTCGGAGCCGTCAATC 1297736
Query 119673 CACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAA 119732
|| ||| ||||| |||||||| || | |||||||||||||| ||| || |||
Sbjct 1297737 CAGCGGAGCGCCCAATTGGCCTTCTTCTGGACGCAGGGGACAGTTTCGATTGCGCGGAAG 1297796
Query 119733 AGTTGCTTCTTTTC 119746
|| || ||||| ||
Sbjct 1297797 AGGTGGTTCTTCTC 1297810
>seq370
Length=494299
Score = 82.4 bits (90), Expect = 9e-11
Identities = 226/342 (66%), Gaps = 6/342 (2%)
Strand=Plus/Plus
Query 11529 AGCATCATCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATT 11588
|||| ||||||||||||| | ||||| ||||| ||||| || | ||| || || |
Sbjct 303538 AGCAGAATCAAGAATATCGGCTCGGTTAGTAGCTGCAATTACAATAATACCCGTGTTCCC 303597
Query 11589 GTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG- 11647
|| || || ||||| || || | |||||||| | |||||| || | || |||||
Sbjct 303598 TTCAAAGCCATCCATCTCAGTTAAGAGCTGGTTCAACGTCTGCTCCCTTTCGTCGTTTCC 303657
Query 11648 AGGGC--ATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705
| | |||||| | || | || | | || ||||| ||||| ||||| | || ||
Sbjct 303658 ACCACCAATACCAG-TCCCT--CTCTGCCTCCCCACAGCATCAATTTCATCCACAAACAC 303714
Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765
||||| || || | ||||| | |||||| ||||| || | | || || ||
Sbjct 303715 AATACAAGGAGCATTCTCCTTTGCCTTCTTGAAAAGATCACGAACCCTCGAAGCACCGAC 303774
Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTC 11825
|| || ||||||||||| || | | | ||| | | || |||||| || ||
Sbjct 303775 TCCGACAAACATCTCAACAAACTCCGAACCGGAAATCGAGAAAAACGGAACACCAGCTTC 303834
Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGG 11867
|| || || ||| ||| | || ||||| || ||||| ||
Sbjct 303835 GCCCGCAATAGCTTTAGCCAAAAGGGTCTTTCCGGTACCTGG 303876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588959714813600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |