Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq504 111 2e-19 seq370 82.4 9e-11 >seq504 Length=2204878 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 119553 CCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAG 119612 || ||||| || || | ||||| ||||| |||||||| || || ||||| || ||||| Sbjct 1297617 CCCGGCATCAGCCCCCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAAT 1297676 Query 119613 ATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAAC 119672 || |||||||| |||||||| |||| | ||||| || || | | || ||| | | Sbjct 1297677 ATTCCCTCCACGCAGGCGAAGGCGACAATTCGCTCTGCGAATGATTCGGAGCCGTCAATC 1297736 Query 119673 CACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAA 119732 || ||| ||||| |||||||| || | |||||||||||||| ||| || ||| Sbjct 1297737 CAGCGGAGCGCCCAATTGGCCTTCTTCTGGACGCAGGGGACAGTTTCGATTGCGCGGAAG 1297796 Query 119733 AGTTGCTTCTTTTC 119746 || || ||||| || Sbjct 1297797 AGGTGGTTCTTCTC 1297810 >seq370 Length=494299 Score = 82.4 bits (90), Expect = 9e-11 Identities = 226/342 (66%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 11529 AGCATCATCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATT 11588 |||| ||||||||||||| | ||||| ||||| ||||| || | ||| || || | Sbjct 303538 AGCAGAATCAAGAATATCGGCTCGGTTAGTAGCTGCAATTACAATAATACCCGTGTTCCC 303597 Query 11589 GTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG- 11647 || || || ||||| || || | |||||||| | |||||| || | || ||||| Sbjct 303598 TTCAAAGCCATCCATCTCAGTTAAGAGCTGGTTCAACGTCTGCTCCCTTTCGTCGTTTCC 303657 Query 11648 AGGGC--ATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 | | |||||| | || | || | | || ||||| ||||| ||||| | || || Sbjct 303658 ACCACCAATACCAG-TCCCT--CTCTGCCTCCCCACAGCATCAATTTCATCCACAAACAC 303714 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 ||||| || || | ||||| | |||||| ||||| || | | || || || Sbjct 303715 AATACAAGGAGCATTCTCCTTTGCCTTCTTGAAAAGATCACGAACCCTCGAAGCACCGAC 303774 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTC 11825 || || ||||||||||| || | | | ||| | | || |||||| || || Sbjct 303775 TCCGACAAACATCTCAACAAACTCCGAACCGGAAATCGAGAAAAACGGAACACCAGCTTC 303834 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGG 11867 || || || ||| ||| | || ||||| || ||||| || Sbjct 303835 GCCCGCAATAGCTTTAGCCAAAAGGGTCTTTCCGGTACCTGG 303876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588959714813600