Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq385 185 1e-41 seq1832 109 6e-19 >seq385 Length=2344269 Score = 185 bits (204), Expect = 1e-41 Identities = 234/322 (73%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 169032 TCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTT 169091 || ||||| ||| ||||| ||| | ||||| || || |||||| || |||||||||| Sbjct 1147311 TCTATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 1147370 Query 169092 CACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTT 169151 | | ||||| ||| | | ||||| || || || || | |||||| || | |||| Sbjct 1147371 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 1147430 Query 169152 ACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTA 169211 ||| || |||||||| |||||||| ||||||||||| || || ||||| || || || Sbjct 1147431 ACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 1147490 Query 169212 GATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAG 169271 |||| |||||||| ||||| ||||||||||| || | | || ||||||||||| | Sbjct 1147491 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTG 1147550 Query 169272 TGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACT 169331 | || || || || | ||||| || || | |||||| | || ||||| || ||| Sbjct 1147551 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACC 1147610 Query 169332 TGAACGGATTTAACTTTAACCA 169353 | || || ||||| || ||||| Sbjct 1147611 TAAATGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 109 bits (120), Expect = 6e-19 Identities = 204/297 (69%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 168595 ATTTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCT 168654 ||| |||| ||| || || || ||||| || | || | ||| | | || |||| Sbjct 934717 ATTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCT 934658 Query 168655 AATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCT 168714 | | || |||||||| || ||||||||||| ||||||| |||| | |||| || Sbjct 934657 ACTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CT 934600 Query 168715 ACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCC 168774 |||| |||||||| ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 934599 GCACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCC 934540 Query 168775 TTACCAGTTGGTAATCTTCCACTTCCTAATCGG---AATCTCTGCCTACATGGGTAGACA 168831 ||| | | | | | ||||| || | || || | | ||||||| | | | Sbjct 934539 TTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTGA 934480 Query 168832 GTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGC 168888 ||||||| | | | | | |||| |||| ||| |||||| ||| || |||||||| Sbjct 934479 GTGGGAACT-TAGTTCCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGC 934424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564425993189760