Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq385 197 2e-45 seq1832 100 3e-16 >seq385 Length=2344269 Score = 197 bits (218), Expect = 2e-45 Identities = 237/322 (74%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 170231 TCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTT 170290 || ||||| ||| || |||||| | ||||| || | || ||| || ||||| |||| Sbjct 1147311 TCTATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 1147370 Query 170291 CACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGAT 170350 | | ||||| ||| | | ||||| || || ||||| || || || || | || | Sbjct 1147371 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 1147430 Query 170351 ACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTA 170410 ||| ||| || ||||| |||||||| || || ||||| || || ||||| || ||||| Sbjct 1147431 ACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 1147490 Query 170411 GACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTA 170470 || | ||||||||||||||||| || |||||| |||| | || |||||||| ||| Sbjct 1147491 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTG 1147550 Query 170471 CATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACC 170530 | | |||||||| | |||||||| ||| | | ||||| |||| ||||| ||||||| Sbjct 1147551 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACC 1147610 Query 170531 TTAATGGATTTAACTTCAACCA 170552 | ||||| ||||| |||||||| Sbjct 1147611 TAAATGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 100 bits (110), Expect = 3e-16 Identities = 165/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 169858 TATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCAC 169917 || || ||||| || ||||| ||||| ||||||| |||| | |||| || ||| Sbjct 934653 TACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CTGCAC 934596 Query 169918 TTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTAT 169977 | || || || ||||||||| || | | ||||| ||||| || || |||||||||||| Sbjct 934595 TCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCCTTAT 934536 Query 169978 CAATTAGTTATCTTCCAC---TTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGG 170034 || || || | | ||| || ||| | || | | ||||||| | | ||||| Sbjct 934535 GAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTGAGTGG 934476 Query 170035 GAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTC 170089 ||||| | | |||| ||| |||||| | |||||| ||| |||||||| |||| Sbjct 934475 GAACT-TAGTTCCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGCTC 934422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582831884252800