Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq385 230 3e-55 seq1832 125 8e-24 >seq385 Length=2344269 Score = 230 bits (254), Expect = 3e-55 Identities = 241/317 (76%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| ||||| ||||| || ||||| ||||| ||||| | ||| | ||||| ||| Sbjct 1147632 TGGTTGAAATTAAAACCATTTAGGTTAAAAGCCATAGTGCTGATACCTAAAGCAGTGAAC 1147573 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||| | ||| || || | |||||| ||||||||| Sbjct 1147572 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAATGTAACGAACGAGAATTGTTGAAA 1147513 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || ||||| || ||||||||||||||| Sbjct 1147512 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTT 1147453 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || |||||||| || ||||||| | || || |||||||||| ||||| | | Sbjct 1147452 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 1147393 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | |||||| || | ||||||||||| ||| |||||| | || ||||||||| Sbjct 1147392 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1147333 Query 84393 CCAGCAACTCCCAACAT 84409 ||||| || || ||||| Sbjct 1147332 CCAGCTACGCCTAACAT 1147316 >seq1832 Length=4053948 Score = 125 bits (138), Expect = 8e-24 Identities = 209/299 (70%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 84556 GAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATT 84615 |||| || || || ||| ||||| | |||||| | ||||| | || ||||||| | Sbjct 934422 GAGCTGAATATGCCACAGCAATCCAATGTCGCATATCTAGACGGAACTAA-GTTCCCACT 934480 Query 84616 CACGACCCATGTAAGCAAATG---CACCAATCAGGAAGTGAAAGACAACAAGTTGATAAG 84672 ||||| |||||||| | | | |||||| | ||||| | |||| |||| ||||| Sbjct 934481 CACGAACCATGTAACAACAAGTTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAG 934540 Query 84673 GTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTA 84732 | |||||||| |||| |||||| || || || ||||||||| || || || | || | Sbjct 934541 GACCACCATTGTATAACCATTCATCAATGGATGTTGCTTCCCATATTGGGTAAGAGTGCA 934600 Query 84733 GACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGA 84792 | | ||| | ||| | ||||| | ||||| || || || ||||||||||| | | Sbjct 934601 G--CGATACCTGCAGAAGTAGGAACAATAGCACCTGAGATAATATTGTTTCCGTAAAGTA 934658 Query 84793 GAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAAT 84851 |||| ||| | ||||| |||| |||||||| || || || ||| ||| |||| Sbjct 934659 GAGATCCAAAAATATTTTCACGAATACTATCAATATCTACCGGAGGAGCAACAATGAAT 934717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571257804284960