Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq385 167 7e-37 seq1832 80.6 8e-11 >seq385 Length=2344269 Score = 167 bits (184), Expect = 7e-37 Identities = 230/322 (71%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 26343 TCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAA 26402 || ||||| || || ||||| || ||||| || | || ||| ||||||||| || Sbjct 1147311 TCTATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 1147370 Query 26403 GTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCT 26462 ||||| ||||| | || ||||| ||||| | | || ||| | || | Sbjct 1147371 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 1147430 Query 26463 ATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGA 26522 | | ||||| ||||| ||||| || ||||||||||| || || || || || ||||| Sbjct 1147431 ACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 1147490 Query 26523 GATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTA 26582 |||| || || || ||||| ||||| || || ||||| | |||||||| || ||| Sbjct 1147491 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTG 1147550 Query 26583 CTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACC 26642 ||||||| || || || || ||| | || || | |||||| |||| ||||| ||||||| Sbjct 1147551 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACC 1147610 Query 26643 TAAATGGTTTTAACTTTAACCA 26664 ||||||||||||| || ||||| Sbjct 1147611 TAAATGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 80.6 bits (88), Expect = 8e-11 Identities = 148/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 25907 TTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTA 25966 ||||| | || || || |||||||| ||| | || ||||| ||| || || || Sbjct 934716 TTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCTA 934657 Query 25967 ATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTA 26026 | |||||||||||||| || ||||| || | || || | ||| | |||| || Sbjct 934656 CTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CTG 934599 Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCA 26086 || | |||||| || |||||||| | | || || ||| |||||||||| || || Sbjct 934598 CACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCCT 934539 Query 26087 TATCAACTCATTATCTTCCACTTCTTAATAGGAGTA 26122 ||| |||| ||| | | ||||| ||| | || ||| Sbjct 934538 TATGAACTAATTGTTCTACACTTTTTACTTGGTGTA 934503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146722545864288