Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq385 152 2e-32 seq1832 120 9e-23 >seq385 Length=2344269 Score = 152 bits (168), Expect = 2e-32 Identities = 227/322 (70%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || ||||| ||||| || || || ||||||||||||||| || || | ||| || | | Sbjct 1147632 TGGTTGAAATTAAAACCATTTAGGTTAAAAGCCATAGTGCTGATACCTAAAGCAGTGAAC 1147573 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||||||||| |||||||||||||| || ||| || || Sbjct 1147572 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAATGTAACGAACGAGAATTGTTGAAA 1147513 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 1147512 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTT 1147453 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||| ||||| || ||| | || || | || ||||||| | || ||||| | Sbjct 1147452 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 1147393 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | || ||||||||| ||||| | || |||||||| Sbjct 1147392 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1147333 Query 36393 CCTGCAACACCGAGCATATGGA 36414 || || || || | ||||| || Sbjct 1147332 CCAGCTACGCCTAACATATAGA 1147311 >seq1832 Length=4053948 Score = 120 bits (132), Expect = 9e-23 Identities = 207/298 (69%), Gaps = 6/298 (2%) Strand=Plus/Plus Query 36552 ACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCC 36611 ||| | |||||||| || ||| ||||| | | |||| |||| | ||||||||||| Sbjct 934418 ACATGAGCTGAATATGCCACAGCAATCCAATGTCGCATATCTAGACGG-AACTAAGTTCC 934476 Query 36612 CATTGTCGTCCCAAGT---AAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGA 36668 || | || ||| || || | | ||||| | |||||| | ||||| |||| | Sbjct 934477 CACTCACGAACCATGTAACAACAAGTTACACCAAGTAAAAAGTGTAGAACAATTAGTTCA 934536 Query 36669 TATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 36728 || || || || || |||||||| || || | || || |||||||| |||||||| || Sbjct 934537 TAAGGACCACCATTGTATAACCATTCATCAATGGATGTTGCTTCCCATATTGGGTAAGAG 934596 Query 36729 TGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAG 36788 || || |||| | || | || || || || || ||||| || |||||||| || Sbjct 934597 TGCAG--CGATACCTGCAGAAGTAGGAACAATAGCACCTGAGATAATATTGTTTCCGTAA 934654 Query 36789 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAA 36846 |||| | ||| | | | |||||||||| ||| ||||| || ||||| ||| ||| Sbjct 934655 AGTAGAGATCCAAAAATATTTTCACGAATACTATCAATATCTACCGGAGGAGCAACAA 934712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150450447939048