Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq385 215 6e-51 >seq385 Length=2344269 Score = 215 bits (238), Expect = 6e-51 Identities = 241/322 (75%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 163040 TCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTT 163099 || ||||| | || || || ||||||||||| || || || || ||||||||||| |||| Sbjct 1147311 TCTATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 1147370 Query 163100 CTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTT 163159 | | || |||||| | | ||||| ||||| || || | || || || | |||| Sbjct 1147371 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 1147430 Query 163160 ATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTC 163219 | | || || ||||| ||||| ||||| || ||||| || |||||||| || ||||| | Sbjct 1147431 ACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 1147490 Query 163220 GCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTG 163279 | ||||||||||| ||||| ||||||||| || ||||| | || |||||||| |||| Sbjct 1147491 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTG 1147550 Query 163280 CATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACC 163339 | | ||||| || | |||||||||||||| | ||| | |||||||| || |||| Sbjct 1147551 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACC 1147610 Query 163340 TTAACGGTTTCAACTTCAACCA 163361 | || ||||| || |||||||| Sbjct 1147611 TAAATGGTTTTAATTTCAACCA 1147632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553069507205280