Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq385 192 2e-44 seq1832 100 8e-17 >seq385 Length=2344269 Score = 192 bits (212), Expect = 2e-44 Identities = 238/323 (74%), Gaps = 2/323 (1%) Strand=Plus/Plus Query 42830 TCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTA 42889 || ||||| | || || || || ||||| || || || | ||| |||||||||||| Sbjct 1147311 TCTATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 1147370 Query 42890 GTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCT 42949 | || || ||| | | | | ||||| || ||||| ||| ||| | || | Sbjct 1147371 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 1147430 Query 42950 ACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGAC 43009 ||| || ||||||||||| || |||||||| ||||| || || |||||||| ||||| | Sbjct 1147431 ACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 1147490 Query 43010 GGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCC 43068 | | |||||||||||||| | |||| || ||| ||| || || || ||||| || || Sbjct 1147491 GATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCT 1147549 Query 43069 GCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAAC 43128 |||||||| || ||||| || ||||||||| || | || |||| |||||||| |||||| Sbjct 1147550 GCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAAC 1147609 Query 43129 TTGAATGGTTTTAACTTTAACCA 43151 | ||||||||||| || ||||| Sbjct 1147610 CTAAATGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 100 bits (110), Expect = 8e-17 Identities = 206/302 (68%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 42394 TTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTT 42453 ||||||| ||| ||||||||||| |||||| | ||||||||| | | | ||| ||||| Sbjct 934716 TTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCTA 934657 Query 42454 CTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTA 42513 || || || ||||| || ||||| ||||| | || |||| | | || | || Sbjct 934656 CTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CTG 934599 Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573 || | || | || |||||||| | || |||| |||||| | |||||||| || ||| Sbjct 934598 CACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCCT 934539 Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCG--GTATCTT-CTCTTACTTGGGACGCGAA 42630 ||| | || | || | ||||| | | | ||| ||| | |||| ||| || || Sbjct 934538 TATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTGAG 934479 Query 42631 TGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCT 42690 ||||||| || || ||| || | ||| | | ||||| ||| || || || || | | Sbjct 934478 TGGGAAC-TTAGTTCCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGCTCAT 934420 Query 42691 GT 42692 || Sbjct 934419 GT 934418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143529029752176