Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq385 167 7e-37 seq1832 80.6 8e-11 >seq385 Length=2344269 Score = 167 bits (184), Expect = 7e-37 Identities = 230/322 (71%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || |||||||||||||||||||| ||||| |||| |||||| | || || | | Sbjct 1147632 TGGTTGAAATTAAAACCATTTAGGTTAAAAGCCATAGTGCTGATACCTAAAGCAGTGAAC 1147573 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || |||||||| | ||||| || || ||| Sbjct 1147572 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAATGTAACGAACGAGAATTGTTGAAA 1147513 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || ||||||||||| || Sbjct 1147512 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTT 1147453 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| ||||| | || || | ||| || | | ||||| ||||| Sbjct 1147452 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 1147393 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | ||||| ||||| || ||||||||| ||| || | || ||||| || Sbjct 1147392 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1147333 Query 26297 CCAGCAACACCAGCCATATGGA 26318 ||||| || || ||||| || Sbjct 1147332 CCAGCTACGCCTAACATATAGA 1147311 >seq1832 Length=4053948 Score = 80.6 bits (88), Expect = 8e-11 Identities = 148/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 26539 TACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTC 26598 ||| || | ||| ||||| | | ||| |||| ||| || || |||||||||| ||| || Sbjct 934503 TACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCATTC 934562 Query 26599 GTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGG 26658 || | | |||||||| || |||||| | || || |||| | ||| | || Sbjct 934563 ATCAATGGATGTTGCTTCCCATATTGGGTAAGAGTGCAG--CGATACCTGCAGAAGTAGG 934620 Query 26659 GACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACG 26718 || | || ||||| || |||||||||||||| | || || || ||| ||||| Sbjct 934621 AACAATAGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAAAAATATTTTCACG 934680 Query 26719 TATGCCATCTATATCTACAGGCGGTGCTGCGATGAA 26754 || | ||| |||||||| || || || | ||||| Sbjct 934681 AATACTATCAATATCTACCGGAGGAGCAACAATGAA 934716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147708119975040