Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq385 179 4e-40 seq1832 129 7e-25 >seq385 Length=2344269 Score = 179 bits (198), Expect = 4e-40 Identities = 230/317 (73%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 155515 ATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTG 155574 ||| | || ||||| ||||| ||||| || || || ||| ||||||||| ||||| ||| Sbjct 1147316 ATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTG 1147375 Query 155575 GTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAG 155634 || || ||| | ||| | ||||| || || | || ||| || | ||||||| Sbjct 1147376 GTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGA 1147435 Query 155635 TTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTT 155694 || || ||||| |||||||||||||| ||||| || |||||||| || || || || | Sbjct 1147436 TTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTG 1147495 Query 155695 ATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGG 155754 |||||||| ||||| |||||||| || | | || |||||||| ||||| ||| Sbjct 1147496 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTGCTTGG 1147555 Query 155755 CCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAAC 155814 ||||| || | |||||| |||||| | ||| | || ||||| || ||||| || Sbjct 1147556 CCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACCTAAAT 1147615 Query 155815 GGTTTCAACTTCAACCA 155831 ||||| || |||||||| Sbjct 1147616 GGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 129 bits (142), Expect = 7e-25 Identities = 208/296 (70%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 155074 TTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTA 155133 ||||||| ||| ||||| ||||| |||||| ||||||||||| | ||| ||| || Sbjct 934716 TTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCTA 934657 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | || || ||||| || ||||| |||||| |||| |||| ||| | || | || Sbjct 934656 CTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CTG 934599 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 |||| || || || ||||||||| || | ||||||| ||||| ||||||||||||||| Sbjct 934598 CACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCCT 934539 Query 155254 TTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC---AGCATACTGTGGTCGTCAG 155310 | |||| | || | ||||| | | || | || ||| | |||| || Sbjct 934538 TATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTGAG 934479 Query 155311 TGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGC 155366 ||||||||| || |||||| | ||||| | |||||| ||| ||||| || || Sbjct 934478 TGGGAACTTAGTT-CCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGC 934424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584819029306720