Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02]
2,212 sequences; 322,166,964 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2167 176 9e-39
seq310 165 2e-35
seq2135 156 8e-33
seq582 138 2e-27
seq1 114 3e-20
seq1098 98.7 2e-15
seq2047 91.5 3e-13
>seq2167
Length=1051226
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || ||||||||||| || | || ||||| || || || || || || || || |
Sbjct 210947 CCGCCCCTCAAACGCAGCACAAGATGGAGAGTCGACTCCTTTTGGATGTTGTAGTCTGCA 211006
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| ||||||||||||| |||||||| ||||||||||| | ||| || || || |||||
Sbjct 211007 AGTGTTCTACCGTCTTCAAGTTGTTTCCCAGCAAAGATCAATCTCTGCTGGTCCGGAGGG 211066
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || |||||||| ||||| ||||| || || | ||| ||
Sbjct 211067 ATCCCTTCTTTGTCCTGGATTTTTGCTTTAACATTATCAATTGTGTCTGAACTTTCAACC 211126
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||||||| || ||||||||||| || || ||||||||
Sbjct 211127 TCCAAAGTAATCGTCTTTCCGGTCAACGTCTTAACGAAAATCTGCAT 211173
Score = 176 bits (194), Expect = 9e-39
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || ||||| |||||||| ||||| ||||| | || ||| || |||
Sbjct 211190 AGGACAAGGTGTAGTGTAGACTCTTTCTGGATATTGTAATCCGCGAGGGTTCGCCCATCT 211249
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| |||||||| ||||||||||| | |||||| ||||| ||||| || ||||| || ||
Sbjct 211250 TCGAGTTGTTTCCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATCCCTTCTTTGTCC 211309
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
||||| || ||||| ||||| || || || || | ||| ||||||||||| ||||||
Sbjct 211310 TGAATTTTCGCTTTAACATTATCGATAGTGTCTGAACTTTCAACTTCCAAAGTAATCGTC 211369
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| ||||| || |||||||||||
Sbjct 211370 TTTCCAGTCAATGTCTTGACGAATATCTGCAT 211401
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | || || || || | ||| ||||| || || ||||| ||||||||||| |
Sbjct 210490 ACCACCGCGCAGGCGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATATTATAATCGGC 210549
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | |||||||| || || || ||||||||||| || ||||| || || || ||
Sbjct 210550 AAGCGTGCGTCCGTCTTCGAGCTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGTGG 210609
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||||||||||||||||||||| ||||| || || ||||| | || ||
Sbjct 210610 AATCCCTTCCTTATCTTGAATCTTTGCTTTCACATTGTCGATTGTATCCGAACTCTCCAC 210669
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| ||||| ||||| ||||| |||||||| || || ||||||
Sbjct 210670 CTCCAAAGTGATCGTTTTGCCCGTCAAAGTCTTTACGAAGATTTGCATT 210718
Score = 170 bits (188), Expect = 4e-37
Identities = 168/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| ||||||||||| | || | | ||
Sbjct 203543 ACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATATTATAATCGGCAAGCGTGCGTCC 203602
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || ||||| ||||||||||| || ||||| || || || || || ||||||||
Sbjct 203603 GTCTTCGAGCTGTTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGTGGAATCCCTTCCTT 203662
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|||||||||||||||||| ||||| || || ||||| | || || |||||||| ||
Sbjct 203663 ATCTTGAATCTTTGCTTTCACATTGTCGATTGTATCGGAACTCTCCACCTCCAAAGTGAT 203722
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||| ||||| ||||| ||||| || || || ||||||
Sbjct 203723 CGTTTTGCCCGTCAAAGTCTTGACGAAGATTTGCATT 203759
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||||||| ||||| || || || ||||| || || || || || |||||||| |
Sbjct 203760 CCTCCTCTCAATCGCAGCACCAAATGAAGAGTCGACTCCTTTTGAATGTTATAATCGGCA 203819
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| ||||||| ||||| || || || || |||||||| |||||||| || ||||||||
Sbjct 203820 AGTGTTCTACCATCTTCGAGCTGCTTACCGGCAAAGATCAGTCTTTGCTGGTCTGGAGGG 203879
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| || || || || | ||| |||
Sbjct 203880 ATACCTTCTTTGTCCTGGATTTTCGCCTTGACATTGTCGATTGTGTCTGAACTTTCAACT 203939
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| || ||||| |||||||| || || |||||
Sbjct 203940 TCCAAAGTGATTGTCTTTCCAGTCAATGTCTTTACGAAAATTTGCAT 203986
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| ||||| ||||||||||| ||||| ||||||| || |||| || |||
Sbjct 204003 AGCACAAGGTGGAGAGTCGATTCTTTCTGAATATTGTAATCAGCCAGCGTTCTGCCATCT 204062
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || || ||||||||||||||||| || || ||||| || ||||| || |||
Sbjct 204063 TCGAGCTGCTTACCTGCAAAGATTAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 204122
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| || || ||||| ||||| || || || || | ||| ||||||||||| ||||||
Sbjct 204123 TGGATTTTGGCTTTAACATTGTCGATTGTGTCTGAACTTTCGACTTCCAAAGTAATCGTC 204182
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| ||||| || || || |||||
Sbjct 204183 TTTCCAGTCAATGTCTTGACGAAGATTTGCAT 204214
Score = 170 bits (188), Expect = 4e-37
Identities = 167/213 (78%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || |||||||||||||| ||||| ||||||| || ||| ||| |||
Sbjct 204687 AGGACAAGGTGGAGTGTAGATTCTTTCTGGATATTGTAATCAGCGAGGGTTCGACCATCT 204746
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| ||||| || ||||||||||| | |||||| || || ||||| || |||||||| ||
Sbjct 204747 TCGAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCC 204806
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777
|| ||||||||||| ||||| || |||||||| | || | || ||||| | ||| || ||
Sbjct 204807 TGGATCTTTGCTTTGACATTATCGATCGTATC-TGAGCTCTCGACTTCAAGAGTGATGGT 204865
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | || || ||||| ||||||||
Sbjct 204866 CTTCCCGGTAAGAGTTTTCACAAAAATCTGCAT 204898
Score = 170 bits (188), Expect = 4e-37
Identities = 167/213 (78%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || |||||||||||||| ||||| ||||| | || ||| ||||||
Sbjct 211418 AGGACAAGGTGGAGTGTAGATTCTTTCTGGATATTGTAATCCGCGAGGGTTCGCCCGTCT 211477
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| |||||||| |||||||||||||| || || ||||| ||||| |||||||||||||||
Sbjct 211478 TCGAGTTGTTTCCCAGCAAAGATTAGCCTCTGCTGATCCGGAGGAATTCCTTCCTTATCT 211537
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777
||||| || | || || || || | ||||| | || | || || || | ||| |||||
Sbjct 211538 TGAATTTTAGACTTGACGTTGTCTACGGTATC-TGAGCTCTCGACCTCGAGAGTGATCGT 211596
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | || |||||||||||||||||
Sbjct 211597 CTTACCAGTAAGAGTTTTTACAAATATCTGCAT 211629
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || ||||||||||| || ||||| ||||| | || ||| || |||
Sbjct 204915 AGGACAAGGTGGAGTGTAGATTCTTTTTGGATATTGTAATCTGCGAGGGTTCGGCCATCT 204974
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| |||||||| ||||||||||||| || || || || || || |||||||||||||||
Sbjct 204975 TCGAGTTGTTTACCAGCAAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTATCT 205034
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
||||| || ||||| || || || |||||||| | || || || | ||| ||||||
Sbjct 205035 TGAATTTTAGCTTTGACGTTGTCGATCGTATCTGAACTCTCGACCTCGAGAGTGATCGTC 205094
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | ||||||||||| ||||||||
Sbjct 205095 TTGCCGGTAAGAGTCTTTACAAAGATCTGCAT 205126
Score = 163 bits (180), Expect = 6e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| ||||||||||| ||||| ||||||| || ||| ||| ||||| |||||
Sbjct 204468 TGGAGAGTCGATTCTTTCTGGATATTGTAATCAGCGAGGGTTCGACCATCTTCAAGTTGC 204527
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|||||||| ||||| | |||||| || |||||||| || |||||||| ||||| || ||
Sbjct 204528 TTTCCAGCGAAGATCAATCTTTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATTTTG 204587
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
||||| || || || || || || | ||| || |||||||| || || ||||| ||
Sbjct 204588 GCTTTGACGTTGTCGATTGTGTCTGAACTTTCAACCTCCAAAGTGATTGTTTTGCCGGTA 204647
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || |||||||| ||||||||
Sbjct 204648 AGAGTTTTTACAAAAATCTGCAT 204670
>seq310
Length=2395884
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || ||||| ||||| ||||||||||| | || | | |||
Sbjct 1997647 ACGAAGCACAAGGTGAAGGGTGGATTCCTTCTGGATATTATAATCCGCAAGTGTACGACC 1997588
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||||| || || || |||||||| || || |||||||| || || || ||||| ||
Sbjct 1997587 ATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGTTGATCAGGTGGGATCCCTTCTTT 1997528
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || || || || || ||||| |||||||||||| | ||| || |||||||| ||
Sbjct 1997527 ATCCTGGATTTTCGCCTTGACATTGTCAATCGTATCAGAACTTTCCACCTCCAAAGTGAT 1997468
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||| || |||||
Sbjct 1997467 AGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 1997432
Score = 161 bits (178), Expect = 2e-34
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || ||||||||||| || | || || |||||||| ||||| ||||| ||||| |
Sbjct 1996746 CCCCCCCTCAAACGCAGCACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAATCTGCA 1996687
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| |||| || ||||| ||||| || |||||||| || | ||| || || ||||||||
Sbjct 1996686 AGGGTTCTGCCATCTTCCAGTTGCTTCCCAGCAAATATCAATCTCTGCTGGTCTGGAGGA 1996627
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCTAC 82762
||||| |||||||||||||| ||||| || ||||| ||||| || || | || ||| ||
Sbjct 1996626 ATTCCCTCCTTATCTTGAATTTTTGCCTTGACATTGTCAATGGTGTC-TGAGCTTTCGAC 1996568
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || ||||| || || | || || ||||| || |||||
Sbjct 1996567 TTCAAGGGTAATTGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCAT 1996520
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| |||||||| |||| ||| | || || || || || || || ||||||||||| |
Sbjct 1997430 CCGCCTCTCAACCGCAAAACCAGATGAAGCGTCGACTCCTTTTGGATATTATAATCTGCA 1997371
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || ||||| || || || || |||||||| | | ||| || ||||||||
Sbjct 1997370 AGTGTCCTCCCATCTTCGAGCTGCTTACCTGCAAAGATCAAACGTTGCTGGTCTGGAGGA 1997311
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| |||||||| || || || ||||| || ||||| || | ||| ||
Sbjct 1997310 ATACCTTCCTTGTCTTGAATTTTCGCCTTCACATTGTCGATCGTGTCTGAACTTTCAACC 1997251
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || || || || ||||| ||||| ||||| ||||||||
Sbjct 1997250 TCCAGTGTAATGGTTTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 1997204
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || ||||| || || || || || ||||| | || |||| ||
Sbjct 1996278 CGGAGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAATCTGCAAGGGTTCTGCCA 1996219
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| |||||||| ||||| |||||||| ||||| || || || || || ||||||||
Sbjct 1996218 TCTTCGAGTTGTTTGCCAGCGAAGATTAGCCTTTGCTGGTCAGGGGGAATCCCTTCCTTG 1996159
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| || || || || ||||| || || ||||| | || || || | ||||||
Sbjct 1996158 TCTTGGATTTTAGCCTTGACATTGTCGATTGTATCGGAACTCTCGACCTCGAGAGTTATA 1996099
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || | ||||| ||||||||||||||
Sbjct 1996098 GTTTTTCCGGTTAGAGTCTTGACAAATATCTGCAT 1996064
Score = 123 bits (136), Expect = 5e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| ||||| ||||| | || |||| ||
Sbjct 1996507 ACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAATCTGCAAGGGTTCTGCC 1996448
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| ||||| || |||||||| || | ||| || || || || || || ||||||||
Sbjct 1996447 ATCTTCAAGTTGCTTACCAGCAAAAATCAATCTCTGCTGGTCAGGGGGGATGCCTTCCTT 1996388
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773
|||||| |||||||| |||||||| || || || || | || | || || || | ||| |
Sbjct 1996387 ATCTTGGATCTTTGCCTTTACATTGTCGATTGTGTC-TGAGCTCTCAACCTCAAGAGTGA 1996329
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || || || | || || || || || |||||
Sbjct 1996328 TGGTTTTACCGGTGAGAGTTTTGACGAAAATTTGCAT 1996292
>seq2135
Length=1067647
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| | ||| || || ||||| || ||||| || ||||| || || |||||||
Sbjct 902049 TACCACCTCTGAGACGGAGGACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAG 901990
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | |||||||| |||||||| ||||||||||| | || || || || || |
Sbjct 901989 CAAGAGTGCGCCCGTCTTCGAGTTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGG 901930
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| || || ||||| ||||| || || |||||||| ||| | || |
Sbjct 901929 GAATGCCCTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCAATCGTGTCAGAACTCTCGA 901870
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| | || || ||||| || || | ||||| ||||||||||||||
Sbjct 901869 CTTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTGACAAATATCTGCAT 901821
Score = 156 bits (172), Expect = 8e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || || || || || |||||||| |||||||||| ||| | || ||
Sbjct 903176 ACGGAGGACAAGATGAAGGGTGGACTCCTTCTGTATGTTATAATCAGCAAGAGTCCTCCC 903117
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || ||||| ||||||||||| | || || || || || || || || |||||
Sbjct 903116 ATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCCTCCTT 903057
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| ||||| || || ||||| || || | || || |||||||| ||
Sbjct 903056 ATCCTGAATCTTAGCTTTGACGTTGTCAATGGTGTCCGAACTCTCCACCTCCAAAGTGAT 902997
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||||||||||||
Sbjct 902996 GGTCTTACCAGTCAAAGTCTTCACAAATATCTGCAT 902961
Score = 138 bits (152), Expect = 2e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| ||||| | ||| || ||||| ||||| || || || || ||||| || || |
Sbjct 902959 CCTCCCCTCAACCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGCC 902900
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | | ||| || || | || || || |||||||| || || || || || || ||
Sbjct 902899 AAAGTGCGACCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGTGGG 902840
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
||||||||||| ||||||||||| ||||| || || |||||||| || || | || ||
Sbjct 902839 ATTCCTTCCTTGTCTTGAATCTTGGCTTTGACGTTGTCAATCGTGTC-GGAGCTCTCCAC 902781
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || | ||||| ||||| ||||||||
Sbjct 902780 CTCCAAGGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 902733
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| | ||| || || ||||| || ||||| || || || || || ||||| |
Sbjct 901821 TACCCCCTCTGAGACGGAGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCGG 901762
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | |||||||| |||||||| ||||||||||| | ||||| || || ||||
Sbjct 901761 CAAGAGTGCGCCCGTCTTCGAGTTGTTTGCCAGCAAAGATCAACCTTTGCTGGTCCGGAG 901702
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || ||||| || || || || || || || || ||| |
Sbjct 901701 GGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTTTCCA 901642
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || ||||| || |||| || || ||||| ||||||||
Sbjct 901641 CCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 901593
Score = 134 bits (148), Expect = 3e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
||||| ||||| ||||| || || || || || ||||| | ||| | | ||| ||
Sbjct 902716 AGAACCAAGTGAAGAGTGCTCTCCTTTTGGATGTTGTAATCGGCAAGAGTACGACCATCC 902657
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | || || || |||||||| || |||||||| || || || ||||||||||| |||
Sbjct 902656 TCCAACTGCTTCCCTGCAAAGATCAGCCTTTGTTGGTCCGGTGGGATTCCTTCCTTGTCT 902597
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777
|||||||| ||||| ||||| ||||| || || || | || || ||||| || || ||
Sbjct 902596 TGAATCTTGGCTTTGACATTATCAATAGTGTC-GGAGCTCTCAACCTCCAAGGTAATGGT 902538
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||||
Sbjct 902537 CTTCCCGGTGAGAGTCTTGACAAAAATCTGCAT 902505
Score = 116 bits (128), Expect = 7e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| ||||| ||| || || || || ||||| | ||| | | ||| ||
Sbjct 902260 AGCACCAAGTGAAGAGTGCTTTCCTTTTGGATGTTGTAATCGGCAAGAGTACGACCATCC 902201
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | || || || ||||| || | || || ||||| || || || |||||||| |||
Sbjct 902200 TCCAACTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGGGGAATCCCTTCCTTGTCT 902141
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777
|||||||| ||||| || || ||||| || || || | || || ||||| || || ||
Sbjct 902140 TGAATCTTGGCTTTGACGTTATCAATAGTGTCGG-AGCTCTCAACCTCCAAGGTAATGGT 902082
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||||||||||||
Sbjct 902081 CTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 902049
Score = 102 bits (112), Expect = 2e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| ||||| || || || || || ||||| | ||| | | ||| |||
Sbjct 902488 AGCACCAAGTGAAGAGTGCTCTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCT 902429
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || ||||||||||| | || || || || || || || || ||||| ||
Sbjct 902428 TCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 902369
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777
|| ||||| ||||| || || ||||| || || || | || || || || || || ||
Sbjct 902368 TGTATCTTAGCTTTAACGTTGTCAATGGTGTC-GGAGCTCTCGACCTCTAAGGTGATGGT 902310
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||||
Sbjct 902309 CTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 902277
>seq582
Length=2128859
Score = 138 bits (152), Expect = 2e-27
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || ||||| | |||||| ||||||||||| || || ||||| || || || ||||
Sbjct 299444 TACCACCCCTCAACCTCAGAACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAG 299385
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||||||| || || ||||| || || || || || || || ||||| |
Sbjct 299384 CCAATGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCTGGTG 299325
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || |||||||| || ||||| || || ||||| || || || ||| || | ||
Sbjct 299324 GGATCCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCA-GAGCTCTCG 299266
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 299265 ACCTCAAGGGTGATGGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 299216
Score = 129 bits (142), Expect = 1e-24
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || ||||| ||||| || ||||| || |||||||| |
Sbjct 298988 TACCACCACGGAGACGGAGGACCAAATGCAGTGTAGACTCCTTCTGGATGTTATAATCTG 298929
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || || || || || |||||||||||||| | |||||| ||||| || |
Sbjct 298928 CCAAAGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAATCTTTGCTGATCCGGGG 298869
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || |||||||| || || ||||| || || ||||| ||||| || || || | ||
Sbjct 298868 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTC-GGAGCTCTCC 298810
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| | || || ||||| || || | ||||| || || ||||||||
Sbjct 298809 ACTTCGAGGGTGATGGTCTTCCCAGTAAGGGTCTTGACGAAAATCTGCAT 298760
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| ||||| ||||| || ||||| || ||||| || || || || |
Sbjct 291616 TACCACCACGCAGACGAAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGG 291557
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | ||| ||||| || || ||||| || ||||| || ||||| || ||||| |
Sbjct 291556 CCAAAGTCCGACCATCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTTTGCTGGTCTGGGG 291497
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||||||||| || || ||||| || || ||||| || || || || | || |
Sbjct 291496 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATAGTGTCGGAACTCTCAA 291437
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || ||||| || || | ||||| || || ||||||||
Sbjct 291436 CCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCAT 291388
Score = 120 bits (132), Expect = 6e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || ||||| | |||||| ||||||||||| || || ||||| || || || ||||
Sbjct 292072 TACCACCCCTCAACCTCAGAACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAG 292013
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||||||| || || ||||| || || || || || || || ||||| |
Sbjct 292012 CCAATGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCTGGTG 291953
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || |||||||| || ||||| || || || || || || || ||| || | ||
Sbjct 291952 GGATCCCCTCCTTATCCTGGATCTTAGCCTTCACGTTGTCGATGGTGTCA-GAGCTCTCG 291894
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||| || || | ||||| || || ||||||||
Sbjct 291893 ACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTCTTGACGAAGATCTGCAT 291844
Score = 95.1 bits (104), Expect = 2e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || ||||| ||||| || || || || || || || || |
Sbjct 290930 CCACCACGCAGACGGAGGACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGCG 290871
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || ||||| || |||||||| || ||||| || || || ||
Sbjct 290870 AGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCAAAGATGAGCCTTTGCTGGTCCGGGGGA 290811
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|||||||||||||| || || || || || || || || || || || ||| ||
Sbjct 290810 ATTCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCCACC 290751
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | || || || || || |||||
Sbjct 290750 TCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 290704
>seq1
Length=4921564
Score = 114 bits (126), Expect = 3e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| ||||| || || ||||| || || ||||| | || | | ||
Sbjct 4756914 ACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTGCGGCC 4756973
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || ||||| || || ||||| || || || || || ||||| || ||||||||
Sbjct 4756974 GTCCTCGAGCTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTT 4757033
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || ||||| || || ||||| || || || || | ||| || || | || ||
Sbjct 4757034 ATCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCGAGCGTGAT 4757093
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 4757094 TGTCTTGCCCGTTAGGGTCTTGACGAAGATCTGCAT 4757129
>seq1098
Length=1756062
Score = 98.7 bits (108), Expect = 2e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| | || ||| | ||| || || |||||||| || ||||| ||||| |
Sbjct 778428 CCACCCCTCAGCCTCAAAACGAGGTGAAGGGTCGATTCTTTTTGGATATTGTAATCTGCC 778369
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | |||| || ||||||| ||||| |||||||| || || || || || || ||||||
Sbjct 778368 AAAGTTCTGCCATCTTCTAACTGTTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGT 778309
Query 82704 ATTCCTTCCTTATCTTGAA 82722
|||||||| || || ||||
Sbjct 778308 ATTCCTTCTTTGTCCTGAA 778290
>seq2047
Length=1241070
Score = 91.5 bits (100), Expect = 3e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| || | | |||||| | ||| || || ||||||||||| ||||||||||| |
Sbjct 887189 TACCTCCCCTGAGTCTCAGAACAAGGTGGAGCGTCGATTCTTTCTGGATATTATAATCCG 887248
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| || ||||| | |||||| || || || || | ||| || ||||| || |
Sbjct 887249 CCAACGTTCGTCCATCTTCCAATTGTTTACCGGCGAATATCAATCTCTGCTGATCGGGCG 887308
Query 82702 GTATTCCTTCCTTATCTTGA 82721
|||| ||||| || || |||
Sbjct 887309 GTATGCCTTCTTTGTCCTGA 887328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981799373789868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |