Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq385 219 1e-52 seq1832 93.3 1e-14 >seq385 Length=2344269 Score = 219 bits (242), Expect = 1e-52 Identities = 241/318 (76%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 20051 ATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTT 20110 ||| | || || |||||||||||||| || || ||||||||||| ||||| ||||| ||| Sbjct 1147316 ATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTT 1147374 Query 20111 GTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAA 20169 | || | || | ||| | | || || || ||| | ||| | || | ||||||| Sbjct 1147375 GGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAG 1147434 Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229 ||||| ||||| ||||| || ||||| || ||||||||||||||||| ||||| || || Sbjct 1147435 ATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATT 1147494 Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289 |||||||||||| ||| |||||||||| ||||| |||| |||||||| ||||| || Sbjct 1147495 GATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTGCTTG 1147554 Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349 ||| || || || || |||||| |||| || || | || ||||| ||||| || || Sbjct 1147555 GCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACCTAAA 1147614 Query 20350 CGGTTTCAACTTTAACCA 20367 ||||| || || ||||| Sbjct 1147615 TGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 93.3 bits (102), Expect = 1e-14 Identities = 204/301 (68%), Gaps = 10/301 (3%) Strand=Plus/Minus Query 19609 ATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCT 19668 |||||||| ||||| || || || |||||| | || || ||| | | || || Sbjct 934717 ATTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCT 934658 Query 19669 TCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGA 19726 ||||| |||||||| || || || || || | ||||| | | ||| | |||| Sbjct 934657 ACTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCA--GGTATCG-- 934602 Query 19727 CTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGA 19786 || |||| |||||||| |||||||| | || ||||||||||| | ||||| || || Sbjct 934601 CTGCACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGT 934542 Query 19787 CCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGG---CATCTATGCTTACATGGGACGA 19843 || | |||| | || | ||||| | |||| | | | |||||||| || Sbjct 934541 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGT 934482 Query 19844 GAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCT 19903 |||||||||||||| | || |||| ||| | | ||||||| ||| || || || ||| Sbjct 934481 GAGTGGGAACTTAG-TTCCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGCT 934423 Query 19904 C 19904 | Sbjct 934422 C 934422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148824890639496