Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq385 197 4e-46 seq1832 120 9e-23 >seq385 Length=2344269 Score = 197 bits (218), Expect = 4e-46 Identities = 236/318 (74%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 19270 ATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTT 19329 ||| | || || |||||||| |||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 1147316 ATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTT 1147374 Query 19330 GTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAA 19388 | || | || | ||| | | ||||| || ||| | | |||| || | || |||| Sbjct 1147375 GGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAG 1147434 Query 19389 GTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCT 19448 ||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||| || | Sbjct 1147435 ATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATT 1147494 Query 19449 TATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508 || ||||| || || ||||||||| ||||| |||||||||| | |||||||| Sbjct 1147495 GATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCGTTACATTTCTTCCTAGCTGCTTG 1147554 Query 19509 GCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAA 19568 |||||| || || || ||||| | || | || | ||||| ||||| || ||| | || Sbjct 1147555 GCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTTAACCTAAA 1147614 Query 19569 TGGCTTTAACTTTAACCA 19586 ||| ||||| || ||||| Sbjct 1147615 TGGTTTTAATTTCAACCA 1147632 >seq1832 Length=4053948 Score = 120 bits (132), Expect = 9e-23 Identities = 212/304 (70%), Gaps = 10/304 (3%) Strand=Plus/Minus Query 18829 TTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTT 18888 ||||||| ||| ||||| ||||| |||||| | || || || | || || ||| Sbjct 934716 TTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCTA 934657 Query 18889 CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGAC 18946 ||||| |||||||| || || || || || | ||||| | | ||| | |||| | Sbjct 934656 CTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCA--GGTATCG--C 934601 Query 18947 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 19006 | |||| |||||||| |||||||| | || ||||||||||| | ||||| || || | Sbjct 934600 TGCACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTC 934541 Query 19007 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT---CTATGCTTACATGGGACGCG 19063 | | |||| | || | ||||| | |||| || | | |||||||| || | Sbjct 934540 CTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTG 934481 Query 19064 AGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTC 19123 ||||||||||||| | || |||| ||||| | ||||||| ||| || || ||||||| Sbjct 934480 AGTGGGAACTTAG-TTCCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGCTC 934422 Query 19124 CTGT 19127 ||| Sbjct 934421 ATGT 934418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141145092373896