Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1098 84.2 2e-11 >seq1098 Length=1756062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||||||||| | || ||| || || ||||| || | ||| || ||||| |||||| Sbjct 778295 GACAAAGAAGGAATACCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAGTTAGAA 778354 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | |||| ||| |||||||| || ||||||||||| || || || | || ||| Sbjct 778355 GATGGCAGAACTTTGGCAGATTACAATATCCAAAAAGAATCGACCCTTCACCTCGTTTTG 778414 Query 106473 AGGTTACGAGGAGG-ATAATGAT 106494 ||| | | || || | |||||| Sbjct 778415 AGGCTGAGGGGTGGAACAATGAT 778437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402318753696896