Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq657 82.4 6e-11 >seq657 Length=2055263 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 41079 CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATG 41138 |||||||| || ||| ||||| ||||| || || |||| ||| | || | ||||||| Sbjct 1301358 CAGTTTTATGTAGCCAACGGTGAGCTGTCTTGCCAGATGTACCAACGGTCTGCTGACATG 1301417 Query 41139 GGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACAC 41198 || || || || ||||||||||| || ||||| || | |||| ||||||||| || Sbjct 1301418 GGTCTTGGAGTGCCGTTTAACATTGCATCGTATGCGCTTTTAACGTGTATGATTGCTCAT 1301477 Query 41199 GTT 41201 ||| Sbjct 1301478 GTT 1301480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445285083060