Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq504 84.2 7e-11 >seq504 Length=2204878 Score = 84.2 bits (92), Expect = 7e-11 Identities = 123/173 (71%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| | ||||| || || || || ||| | || || ||| ||||| Sbjct 1297717 TTCGCAGAGCGAATTGTCGCCTTCGCCTGCGTGGAGGGAATATTCTTCTCCGGAAGCTTC 1297658 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || ||||||||||| |||| ||||| || || |||| || |||| || ||||| Sbjct 1297657 TGCG-CCATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGTTGACTTTCTCGAACGA 1297599 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 | || ||| |||||||||||||| ||||| ||||| || || || |||| Sbjct 1297598 GTTAATTTCTCGCGACGAGGGTTTGCACTGCGATTTCGCGTGCCTGCTGTACA 1297546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588290984572340