Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq370 102 1e-16 seq422 91.5 2e-13 seq2203 87.8 2e-12 >seq370 Length=494299 Score = 102 bits (112), Expect = 1e-16 Identities = 229/336 (68%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT-TTCATTATCAA 9614 |||||| ||||| | || || || || || || |||| |||||| || ||| | |||| Sbjct 303544 ATCAAGAATATCGGCTCGGTTAGTAGCTGCAATTACAATAATACCCGTGTTCCCT-TCAA 303602 Query 9615 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9674 | ||||||||||| || || || ||||| | || || |||| ||| || || | Sbjct 303603 AGCCATCCATCTCAGTTAAGAGCTGGTTCAACGTCTGCTCCCTTTCGTCGTTTCCACCAC 303662 Query 9675 TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734 | ||||| | | ||| | ||||| |||||||| ||||| | || || || || | Sbjct 303663 CAATACCAGTCCCTCTCTGCCTCCCCACAGCATCAATTTCATCCACAAACACAATACAAG 303722 Query 9735 GTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACA 9793 | ||| || | | ||| ||| ||||| || || | | || || || || ||| Sbjct 303723 GAGCATTCTCCTTTGCCTTCTTGAAA-AGATCACGAACCCTCGAAGCACCGACTCCGACA 303781 Query 9794 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9852 |||||||| ||||| | | ||||| || | || || || ||| || ||| ||||| Sbjct 303782 AACATCTCAACAAACTCCGAACCGGAA-ATCGAGAAAAACGGAACACCAGCTTCGCCCGC 303840 Query 9853 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 ||| ||| || | ||| ||||| || |||||||| Sbjct 303841 AATAGCTTTAGCCAAAAGGGTCTTTCCGGTACCTGG 303876 >seq422 Length=4557820 Score = 91.5 bits (100), Expect = 2e-13 Identities = 216/320 (68%), Gaps = 10/320 (3%) Strand=Plus/Minus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| |||||||| || ||||| || || ||||| || || || |||||||||||| | Sbjct 4441801 AAACCCATCCATTTCAGTCAAGAGCTGATTAATCGTCTGCTCTCGTTCATCATTCCCACC 4441742 Query 9673 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 | ||| || | | ||| | ||||| |||||||||||||||||||| || ||||| Sbjct 4441741 CCCCATACCCGCCCCCCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATGCA 4441682 Query 9733 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACAC 9788 || ||||| | || || || | ||||| ||| || | || || |||| Sbjct 4441681 AGG--CGCCTTCGCCTTGGCCTTCTCGAACAAATCCC--TCACCCTAGAAGCACCTACAC 4441626 Query 9789 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 9848 ||||||| | ||| ||||| | | ||||| || || || || || || |||| Sbjct 4441625 CAACAAAAAGCTCAACAAATTCCGAAGCGGAGCACGAGAAAAACGGCACCCCAGCCTCAC 4441566 Query 9849 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9908 | || | || | ||| | || ||||| || || || ||| ||| | | || |||| Sbjct 4441565 CAGCCACCGCCCTGGCCAACAGCGTCTTCCCGGTTCCCGGCGGGCCCACCA-GAAGGCAT 4441507 Query 9909 CTCGT-GGAATCTTGGCGCC 9927 | | | |||||||| || || Sbjct 4441506 CCCTTCGGAATCTTCGCACC 4441487 >seq2203 Length=1028949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 213/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTG- 9671 ||| || ||||| || ||||| || || ||||| || || || | ||||||||| || Sbjct 668709 AAACCCGTCCATTTCAGTCAAGAGCTGATTAATCGTCTGCTCTCTCTCATCATTCCCTCC 668768 Query 9672 GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 9731 || | | || || | | ||| | ||||| ||||||||||||||||| || || |||| Sbjct 668769 GCCCATC-CCGGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATAAACACAATGC 668827 Query 9732 ATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 9789 | || |||||| | || || || ||||||| || | | || || ||||| Sbjct 668828 AAGG--AGCTTTCGCCTTTGCCTTCTCGAACAGATCCCTCACTCTCGAAGCTCCAACACC 668885 Query 9790 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9849 ||||| | ||||||||| | | || | ||| | ||| || ||| || ||| || Sbjct 668886 TACAAAAAGCTCCACAAATTCCGACGCCGCACAGGAAAAGAACGGTACACCAGCTTCGCC 668945 Query 9850 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909 | || || | || || || || || || ||||| || ||| | |||||| || Sbjct 668946 GGAAACCGCCCTCGCCAGGAGGGTTTTTCCTGTACCAGGTGGGCCCACCAGGAGGCAGCC 669005 Query 9910 TCGTGGAATCTTGGCGCC 9927 | || ||||| ||||| Sbjct 669006 TTTCGGGATCTTCGCGCC 669023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583244672838880