Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq95 141 1e-28 seq1832 113 5e-20 >seq95 Length=846448 Score = 141 bits (156), Expect = 1e-28 Identities = 206/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | | | || || | | ||| || || Sbjct 576307 ACCTGTAACTATTCAATACCCCTACGAAAAATTGCTCACATCGGAACGTTTCCGAGGCCG 576248 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || |||| ||| ||||| || || || |||||||| || ||||| | ||||| ||||| Sbjct 576247 AATCCACTTTGAATTTGATAAATGCATTGCCTGTGAAGTATGTGTTCGTGTATGTCCTAT 576188 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATG--AACAAACAG-ACAAAGAAGAAAGAACTTAG 19471 ||||||| || || |||||| || ||| || | | |||||| || ||||| Sbjct 576187 AGATCTACCTGTTGTTGATTGGAAATTGGAAACGAATATTAGAAAGAAACAATTACTTA- 576129 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 |||| || || |||||| ||||| || || ||||| || || |||||||| || Sbjct 576128 --ATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTCC 576071 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 576070 AACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 576023 >seq1832 Length=4053948 Score = 113 bits (124), Expect = 5e-20 Identities = 205/297 (69%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 176217 ATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCT 176276 ||| |||| || || || || ||||| || ||||||| ||| | |||||||| Sbjct 934717 ATTCATTGTTGCTCCTCCGGTAGATATTGATAGTATTCGTGAAAATATTTTTGGATCTCT 934658 Query 176277 ACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACT 176336 ||| || |||||||| || |||||||| || | || || | || | |||| || Sbjct 934657 ACTTTACGGAAACAATATTATCTCAGGTGCTATTGTTCCTACTTCTGCAGGTATCG--CT 934600 Query 176337 ACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACC 176396 |||| |||||||| ||||||||| || | |||| |||||| | |||||||| || || Sbjct 934599 GCACTCTTACCCAATATGGGAAGCAACATCCATTGATGAATGGTTATACAATGGTGGTCC 934540 Query 176397 ATACCAACTCGTTGTATTCCACTTCCTTATCGGT---ATCTCAGCTTACATGGGACGCCA 176453 || |||| |||| | ||||| | | ||| | | |||||||| || | Sbjct 934539 TTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAACTTGTTGTTACATGGTTCGTGA 934480 Query 176454 ATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGC 176510 ||||||||||||| | | |||| ||||| | |||||| ||| ||||| || || Sbjct 934479 GTGGGAACTTAGTT-CCGTCTAGATATGCGACATTGGATTGCTGTGGCATATTCAGC 934424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603477713379840