Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq113225 95.1 2e-14 seq64485 89.7 8e-13 seq189138 86.0 9e-12 seq64482 84.2 3e-11 >seq113225 Length=15631 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || || || || || |||| ||| | ||| || || || || ||||| || Sbjct 12340 GTTCCTCCCCTGAGCCTCAACACCAGATGAAGAGTCGACTCCTTTTGGATGTTATAGTCC 12281 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | |||||||| | ||| || ||||| || |||||||||||||||| ||||| || ||| Sbjct 12280 GCAAGAGTTCGTCCATCTTCCAATTGCTTACCAGCAAAAATCAATCGCTGCTGGTCTGGA 12221 Query 146168 GGAATTCCTTCTTTATC 146184 ||||| ||||| || || Sbjct 12220 GGAATACCTTCCTTGTC 12204 >seq64485 Length=1617 Score = 89.7 bits (98), Expect = 8e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 ||||| || | ||| || ||||| || |||||||||| ||||| || | ||| ||| Sbjct 236 ACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCCAGAGTCCTACCATCCTCT 177 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||||| ||||||||||| | || ||||||||||| ||||| ||||| || || || Sbjct 176 AGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTG 118 >seq189138 Length=1569 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || ||||| | | ||||| || | ||| |||||||| || |||||||||| Sbjct 491 CCTCCCCTAAGACGCAGAACCAAGTGAAGAGTCGATTCTTTCTGGATGTTATAATCTGCC 432 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| || | ||| |||| || || ||||||||||| | || |||||||| || ||| Sbjct 431 AGAGTCCTACCATCTTCTAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGA 372 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 371 ATGCCTTCCTTGTCCTG 355 >seq64482 Length=1502 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 ||||| || | ||| || ||||| || |||||||||| ||||| || | ||| ||| Sbjct 266 ACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCCAGAGTCCTACCATCCTCT 207 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||||| ||||||||||| | || |||||||| || ||||| ||||| || || || Sbjct 206 AGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTG 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740979812785920