Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq109320 138 2e-27 >seq109320 Length=8125 Score = 138 bits (152), Expect = 2e-27 Identities = 394/587 (67%), Gaps = 24/587 (4%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || ||| ||| | | || ||||| |||||||| |||| |||||||||| | Sbjct 1570 TGTTCCCTATCCAGTACCCGCAGATCTGGGAGATGTACAAGCAGGCGGAGGCCTCCTTCT 1629 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| |||||||| || ||| ||||||| | | |||||| | | || | Sbjct 1630 GGACCGCCGAGGAGGTCGACCTCTCCCAGGACCTCCGCCACTGGGAGGGCC---TCACCG 1686 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 ||||| | || | | ||| | | |||||||| |||| |||||| || |||| Sbjct 1687 CCGACGAGCGCCATTTCGTCACCCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCG 1746 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGT 125232 || ||| || || | | | || ||| | ||| | ||| || | |||| || Sbjct 1747 TCCTCGAGAACCTCGCCGTC-CGCTTCATGAAGGAGGT--CCAGCTCTCGGAGGCC-CGC 1802 Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACT--CTAC-A 125288 || || ||||| ||||| ||| || |||||| | ||||| || |||||| || | | Sbjct 1803 GCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTA 1862 Query 125289 CTGATTGACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 ||| || | ||| | || ||||| | || || ||||| || |||| Sbjct 1863 CTG---GAGACCTACGTCAAGGACTCCGCCGAG-AAGGACCGCCTCTTCCGTGCCGTCGA 1918 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 ||| || ||| | | ||||| | |||| | || |||||||| | || | Sbjct 1919 CACCGTCCCGGCCGTCGCCCGCAAGGCCGACTGGGCCCTCCGCTGGATCGACGGCGGTGA 1978 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 ||| | ||| || | || |||| |||||| ||| ||||| |||||||| || || Sbjct 1979 GTCCTT---CGCGGAGCGCCTCCTGGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCCGG 2035 Query 125468 TAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 || || |||| ||||||| |||||||||||||| || |||||||| || || || | Sbjct 2036 CAGCTTCTGCG-CCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCGGGGCTCACCTTCT 2094 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 |||||| | || || || ||||||||||| ||||| ||||| ||| Sbjct 2095 CGAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCC 2141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738521062976760