Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq115376 87.8 1e-12 seq112091 87.8 1e-12 >seq115376 Length=10371 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 |||||| || || ||| ||| || ||||| |||||||| || || |||| || Sbjct 7192 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCCAAGGTTCGGCCATCTTC 7133 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 || || || || ||||| || | || |||||||| |||| | ||||| || || Sbjct 7132 CAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTG 7073 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 |||||| ||| || || ||| || || | ||||| |||| || ||||| || Sbjct 7072 GATTTTTGCTTTCACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTT 7013 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | |||||||||||| ||||||||| Sbjct 7012 GCCAGTAAGAGTCTTCACAAAAATTTGCATG 6982 >seq112091 Length=14418 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 |||||| || || ||| ||| || ||||| |||||||| || || |||| || Sbjct 12494 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCCAAGGTTCGGCCATCTTC 12553 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 || || || || ||||| || | || |||||||| |||| | ||||| || || Sbjct 12554 CAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTG 12613 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 |||||| ||| || || ||| || || | ||||| |||| || ||||| || Sbjct 12614 GATTTTTGCTTTCACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTT 12673 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | |||||||||||| ||||||||| Sbjct 12674 GCCAGTAAGAGTCTTCACAAAAATTTGCATG 12704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353592860228148