Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq98175 96.9 3e-15 >seq98175 Length=7825 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 5500 CACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTC 5559 ||| ||||| ||||| || ||||| |||| || || ||||| | | | ||||| Sbjct 6603 CACCCCCGTTGACCCAAACCCGCCCTCGCCCCTCAGAGTCGAGTCCAAGTCCTCGACCTC 6662 Query 5560 TTCCACATCGGGGAACGCA-GCGCG-CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTC 5617 | |||||||| | || | | |||| |||||||||||| || |||||||| | | Sbjct 6663 GACGACATCGGG--AGTCATGATCTTCTCGATGATCAGCTGCGCGATCCGGTCGCCGGCC 6720 Query 5618 TTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAG 5677 || || ||||||||| | | ||||||||| | ||| || || ||| | |||| Sbjct 6721 TTCACTTCGAAATCGACATCAGAGTGGTTGAACAGGATCACCCCGACCGGGCCTCTGTAG 6780 Query 5678 TCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGA 5733 || || || |||||||| || || |||||||| | ||||| ||||| ||| || Sbjct 6781 TCCGCATCGATCACGCCGGCACCAACGTCGATCGAATGCTTCCACGCCAAGCCAGA 6836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428618281846712