Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq64482 113 4e-20 seq107102 109 5e-19 seq115376 104 2e-17 seq112091 104 2e-17 seq64485 104 2e-17 seq189138 95.1 1e-14 seq117103 95.1 1e-14 seq2978 91.5 1e-13 >seq64482 Length=1502 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| |||||||| || || || ||||| || || || | ||| |||| | Sbjct 57 AATGCAAATCTTTGTCAAGACCCTTACTGGAAAGACAATCACTTTGGAAGTGGAGAGCTC 116 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| | | |||| || ||| ||||||| || || |||||| | ||| |||| Sbjct 117 TGACACCATCG-ACAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATTCCCCCAGATC 175 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||||| ||| || ||||| |||| |||| | || |||| ||||||| Sbjct 176 AGCAGAGGCTTATTTTTGCTGGGAAACAGCTAGAGGATGGTAGGACTCTGGCAGATTATA 235 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || |||||||| ||| | || |||| || | || | ||||| Sbjct 236 ACATCCAGAAAGAGTCGACTCTTCACTTGGTTCTGCGTCTGAGGGGAGG 284 >seq107102 Length=7485 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| |||||||| || || || || || || || || | ||| ||| | Sbjct 4412 AATGCAAATCTTTGTCAAGACCCTAACTGGGAAGACGATCACTTTGGAAGTTGAGAGCTC 4353 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| || ||| |||||| || || |||||| | ||| |||| Sbjct 4352 CGACACCATTG-ACAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGATC 4294 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||||| ||||| | ||| || |||||| | || |||| | || |||| ||||| | Sbjct 4293 AGCAAAGGCTTATCTTTGCTGGGAAACAACTTGAGGATGGTAGGACTTTGGCGGATTACA 4234 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || || ||||| ||| | || ||||| || || || | ||||| Sbjct 4233 ACATCCAGAAGGAGTCCACTCTTCACTTGGTGCTGCGACTGAGGGGAGG 4185 >seq115376 Length=10371 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || || || || || ||| |||| ||| | | Sbjct 6983 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTGGAAAGCTCC 7042 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || ||| |||||| || || |||||| |||| || ||| Sbjct 7043 GACACAATTGATAATGTGAAAGCAAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAG 7102 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||| | ||| ||||| || | ||||||| | |||| |||| ||||||||| Sbjct 7103 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCTTGGCTGATTATAAC 7162 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||| || | || ||||| Sbjct 7163 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 7192 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| || || || || || || ||| |||| ||| | Sbjct 6755 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACAATCACCCTCGAGGTGGAAAGCTCG 6814 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| || | | || ||| |||||| || || ||||| |||| || ||| Sbjct 6815 GACACAGTCGATAATGTGAAAGCAAAAATCCAGGACAAGGAAGGGATCCCTCCGGACCAG 6874 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||| | ||| ||||| || | ||||||| | |||| |||||||||||||| Sbjct 6875 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTATAAC 6934 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||| || | || ||||| Sbjct 6935 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 6964 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| || ||||| || || || ||||| || | || ||| | Sbjct 7438 AATGCAGATTTTTGTGAAGACGCTTACTGGGAAGACCATAACTTTGGAGGTGGAAAGCTC 7497 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| || || ||||| || || || || | ||| || | Sbjct 7498 CGACACCATTG-ACAATGTTAAGGCGAAAATCCAAGACAAGGAGGGTATTCCCCCGGACC 7556 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| ||||| || | ||| ||||| || | ||||||| || || | || || |||| Sbjct 7557 AGCAGAGACTCATCTTTGCTGGCAAGCAGCTTGAAGATGGCAGGACTCTTGCAGACTATA 7616 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||| || |||||||||||| | || ||||| Sbjct 7617 ACATCCAGAAAGAGTCTACTCTCCACTTGGTG 7648 >seq112091 Length=14418 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || || || || || ||| |||| ||| | | Sbjct 12703 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTGGAAAGCTCC 12644 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || ||| |||||| || || |||||| |||| || ||| Sbjct 12643 GACACAATTGATAATGTGAAAGCAAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAG 12584 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||| | ||| ||||| || | ||||||| | |||| |||| ||||||||| Sbjct 12583 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCTTGGCTGATTATAAC 12524 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||| || | || ||||| Sbjct 12523 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 12494 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| || || || || || || ||| |||| ||| | Sbjct 12931 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACAATCACCCTCGAGGTGGAAAGCTCG 12872 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| || | | || ||| |||||| || || ||||| |||| || ||| Sbjct 12871 GACACAGTCGATAATGTGAAAGCAAAAATCCAGGACAAGGAAGGGATCCCTCCGGACCAG 12812 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||| | ||| ||||| || | ||||||| | |||| |||||||||||||| Sbjct 12811 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTATAAC 12752 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||| || | || ||||| Sbjct 12751 ATTCAGAAGGAGTCCACCCTCCACTTGGTG 12722 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| || ||||| || || || ||||| || | || ||| | Sbjct 12248 AATGCAGATTTTTGTGAAGACGCTTACTGGGAAGACCATAACTTTGGAGGTGGAAAGCTC 12189 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| || || ||||| || || || || | ||| || | Sbjct 12188 CGACACCATTG-ACAATGTTAAGGCGAAAATCCAAGACAAGGAGGGTATTCCCCCGGACC 12130 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| ||||| || | ||| ||||| || | ||||||| || || | || || |||| Sbjct 12129 AGCAGAGACTCATCTTTGCTGGCAAGCAGCTTGAAGATGGCAGGACTCTTGCAGACTATA 12070 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||| || |||||||||||| | || ||||| Sbjct 12069 ACATCCAGAAAGAGTCTACTCTCCACTTGGTG 12038 >seq64485 Length=1617 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| |||||||| || || || ||||| || || || | ||| |||| | Sbjct 27 AATGCAAATCTTTGTCAAGACCCTTACTGGAAAGACAATCACTTTGGAAGTGGAGAGCTC 86 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | | |||| || ||| |||||| || || |||||| | ||| |||| Sbjct 87 TGATACCATCG-ACAATGTCAAAGCGAAAATTCAGGACAAGGAAGGCATTCCCCCGGATC 145 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||||| ||| || ||||| |||| |||| | || |||| ||||||| Sbjct 146 AGCAGAGGCTTATTTTTGCTGGGAAACAGCTAGAGGATGGTAGGACTCTGGCAGATTATA 205 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || |||||||| ||| | || |||| || | || | ||||| Sbjct 206 ACATCCAGAAAGAGTCGACTCTTCACTTGGTTCTGCGTCTGAGGGGAGG 254 >seq189138 Length=1569 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| |||||||| || || || || ||||| || || | ||| ||| | Sbjct 264 AATGCAAATCTTTGTCAAGACTCTTACTGGGAAAACAATCACTTTGGAAGTTGAGAGCTC 323 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | | |||| || ||| |||||| || || |||||| | ||| |||| Sbjct 324 TGATACCATCG-ACAATGTCAAAGCGAAAATTCAGGACAAGGAAGGCATTCCCCCAGATC 382 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||||| ||| || || || ||||||||| | || |||| ||||||| Sbjct 383 AGCAGAGGCTTATTTTTGCTGGGAAGCAGCTAGAAGATGGTAGGACTCTGGCAGATTATA 442 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||| || ||||| || ||| | || |||| Sbjct 443 ACATCCAGAAAGAATCGACTCTTCACTTGGT 473 >seq117103 Length=17306 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG-GAGTCCA 115343 ||||||||| ||||| || || || | || || || || || || |||| ||| | Sbjct 8714 AATGCAAATCTTTGTGAAGACCCTAGCTGGGAAGACGATCAC-GTTGAAAGTTGAGAGCT 8656 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| | | |||| || ||| |||||| || || |||||| | ||| ||| Sbjct 8655 CCGACACCATCG-ACAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGAT 8597 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||||| ||||| | ||| || |||||| | || |||| | || |||| |||||| Sbjct 8596 CAGCAAAGGCTTATCTTTGCTGGGAAACAACTTGAGGATGGTAGGACTTTGGCAGATTAT 8537 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || ||||| ||| | || ||||| || || || | || || Sbjct 8536 AACATCCAGAAGGAGTCCACTCTTCACTTGGTGCTGCGACTGAGGGGGGG 8487 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCC 115342 |||||| ||||||||||| || || || ||||||||||| || | || |||| | | Sbjct 8258 AATGCAGATTTTTGTCAAGACTCTGACCGGAAAAACCATCACTCTGGAGGTGGAGAGTTC 8199 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || |||| ||| |||| || || ||| || || || || ||| |||| || Sbjct 8198 AG--ACACCATTG-ACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCAGA 8142 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||| || || |||| ||| || || ||| | ||||||| | || |||| ||||| Sbjct 8141 CCAGCAGAGGCTGATTTTTGCCGGGAAGCAACTGGAAGATGGGAGGACACTGGCTGATTA 8082 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||| || |||||||| ||| | || |||| Sbjct 8081 TAACATCCAGAAAGAGTCAACTCTGCACTTGGT 8049 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || || || || || |||||||| | ||| ||| | Sbjct 8485 ATGCAGATTTTTGTCAAGACCCTTACTGGGAAGACCATTACTTTGGAAGTCGAGAGCTTG 8426 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || ||| || || || || |||||| | ||| |||||| Sbjct 8425 GATACCATTGATAATGTCAAAGCTAAGATACAGGACAAGGAAGGCATTCCCCCAGATCAG 8366 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | |||| || || || ||| | || |||| | || |||| ||||| ||| Sbjct 8365 CAGAGGTTGATTTTCGCCGGGAAGCAACTGGAGGATGGCCGGACACTGGCGGATTACAAC 8306 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||||| ||||| ||| ||||| | ||| Sbjct 8305 ATTCAAAAGGAGTCAACTCTACATCTTGTG 8276 >seq2978 Length=2151 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCC 115342 |||||| ||||||||||| || || || || || ||||| || | || ||| || | Sbjct 31 AATGCAGATTTTTGTCAAGACTCTGACCGGTAAGACCATCACTCTGGAGGTGGAAAGTTC 90 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || |||| ||| |||| || || || || ||||| || ||| |||| || Sbjct 91 AG--ACACCATTG-ACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCGGA 147 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||| || || |||| ||| || || ||| | ||||||| | || |||||||||| Sbjct 148 CCAGCAGAGGCTGATTTTTGCCGGGAAGCAACTGGAAGATGGGAGGACACTGGCCGATTA 207 Query 115462 TAACATTCAAAAAGAGTCTACT 115483 ||||||||| |||||||| ||| Sbjct 208 TAACATTCAGAAAGAGTCGACT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423923611696120