Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq109320 149 1e-30 >seq109320 Length=8125 Score = 149 bits (164), Expect = 1e-30 Identities = 312/462 (68%), Gaps = 6/462 (1%) Strand=Plus/Plus Query 243279 CGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTC 243338 |||| | || || || ||||| ||| | |||| | ||||| || || || | || || Sbjct 1973 CGGTGAGTCCTTCGCGGAGCGCCTCCTGGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTC 2032 Query 243339 CGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCT 243398 ||| || |||||||||||||| ||||| ||| || | ||||| || ||| | Sbjct 2033 CGGCAGCTTCTGCGCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCGGGGCTCACCTT 2092 Query 243399 GTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTA 243458 || |||||| ||||| |||||||||||||| ||| | |||| || | || Sbjct 2093 CTCGAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTA 2152 Query 243459 TTCAAAGCTCCAGAACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGC 243515 || ||| | |||||||| | ||| | || || || ||| | || || Sbjct 2153 CTCGCTGCTGCGGAACAAGC---CGAGCGAGGAGCGTGTGAAGGGGATCGTGCGGGAGGC 2209 Query 243516 AGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAA 243575 || || | ||| ||| ||| | |||||||| | || ||| || | || ||||| Sbjct 2210 CGTCGACATCGAGCGGGAGTTCGTCTGCGACGCGCTGCCGTGCGCCCTGGTGGGGATGAA 2269 Query 243576 CTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGG 243635 | || || || || ||| |||||| ||||| |||||||| | || |||||| || Sbjct 2270 CAGCGACCTGATCGGCAAGTGCATCGAGTTCGTCGCCGACCGGCTGCTCGGCGCGCTCGG 2329 Query 243636 TTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCA 243695 | || || |||||| || | |||||| || | || ||||||||||| ||||| || Sbjct 2330 CTGTGGCAAGGTGTACGACGTGACGAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCA 2389 Query 243696 AGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||| || ||||||||||| ||||| ||| | || || || Sbjct 2390 GGGGAAGACCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCA 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1099008187769350