Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq109320 161 1e-34 seq122528 96.9 4e-15 >seq109320 Length=8125 Score = 161 bits (178), Expect = 1e-34 Identities = 308/451 (68%), Gaps = 2/451 (0%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| ||||| |||||||||||||||||||| |||||||| | || ||| |||||| Sbjct 2429 GTACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAGATGAGCTCCAT 2370 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 | || || |||||| | || | | ||| ||| || | | ||| || | Sbjct 2369 CCAGTCGAACGGGTTCGTCACGTCGTACACC-TTGCCACAGCCGAGCGCGCCGAGCAGCC 2311 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | || | |||| |||| ||| ||| ||| || |||||| || | ||| | Sbjct 2310 GGTCGGCGACGAACTCGATGCACTTGCCGATCAGGTCGCTGTTCATCCCCACCAGGGCGC 2251 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || |||||||| ||| |||| || ||| || || ||||| ||||||||||| | | Sbjct 2250 ACGGCAGCGCGTCGCAGACGAACTCCCGCTCGATGTCGACGGCCTCCCGCACGATCCCCT 2191 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTT 126056 | ||| | | || | || |||| | | |||| ||| || || Sbjct 2190 TCACACGCTCCTCGCTCGGCTTGTTCCGCAGCAGCGAGTAGAGGAGGCAGGCGAAGTCGC 2131 Query 126057 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGAC 126116 |||||| |||||||| ||||||||||| || ||||||||| || || |||||||| | Sbjct 2130 AGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTCGAGAAGGTGAGCCCCGGCATGAGGC 2071 Query 126117 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACAC 126176 |||||||||| | |||||| || || || || || ||||||||||| ||||| || | Sbjct 2070 CCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAGATCCCCTCGACGC 2011 Query 126177 ACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 | ||||| || | ||| ||||| || ||||| Sbjct 2010 AGGCGAAGGCCAGGAGGCGCTCCGCGAAGGA 1980 >seq122528 Length=20092 Score = 96.9 bits (106), Expect = 4e-15 Identities = 189/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935 ||| ||||||||||||||||| || |||||||| ||||| || | ||||||||| | Sbjct 11238 AAACCCATCCATCTCAGTCAATAGCTGATTGATAGTTTGCTCTCTCTCATCATTCCCTCC 11297 Query 10936 CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 10995 | ||| || | | ||| | || || || || || ||||| || || || || || Sbjct 11298 TCCAAGACCAGCTCCTCTCTGCCTCCCCACCGCATCGATCTCATCAATAAACACAATGCA 11357 Query 10996 CGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCA 11054 || || ||| || || ||||| | || | |||||| ||||| ||||||| Sbjct 11358 AGG-TGCTTTCGACTTCGCCTTCTCAAACAAGTCCCTAACTCTCGAAGCACCAACACCCA 11416 Query 11055 CAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCG 11114 |||||| |||||||| | || || | ||| || ||| || ||| | ||||| | Sbjct 11417 CAAACAACTCCACAAATTCGGATGCCGCACACGAGAAGAATGGCACGCCAGCCTCACCGG 11476 Query 11115 CGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 | | || | || | ||||||||||| ||||| || Sbjct 11477 CCACTGCCCTTGCCAAAAGGGTCTTCCCAGTCCCGGG 11513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595307656453080