Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq189138 98.7 7e-16 seq88321 95.1 9e-15 seq64485 95.1 9e-15 seq64482 95.1 9e-15 seq117102 93.3 3e-14 seq167565 89.7 4e-13 seq117103 89.7 4e-13 seq107102 84.2 2e-11 >seq189138 Length=1569 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || | ||| ||||| || || ||||| |||||||| || Sbjct 719 CCACCACGCAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCC 660 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | ||| || || ||| | ||||||||||||||||| ||| Sbjct 659 AGTGTCCGGCCATCCTCGAGTTGCTTCCCTGCGAAAATCAAACGCTGTTGGTCTGGCGGA 600 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||||| || |||||||| ||| | || || || || | || || Sbjct 599 ATTCCTTCCTTGTCCTGTATCTTTGCTTTG-ACATTATCGATCGTGTCAGAGCTCTCCAC 541 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || || || ||||||||||| ||||| Sbjct 540 CTCCAAGGTGATAGTCTTGCCAGTAAGGGTCTTTACAAAAATCTGCAT 493 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || ||||| || ||||| ||||| ||| | || | ||||| Sbjct 474 AACCAAGTGAAGAGTCGATTCTTTCTGGATGTTATAATCTGCCAGAGTCCTACCATCTTC 415 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || || || ||||| | || | | ||| || || ||||| ||||||||||| Sbjct 414 TAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTG 355 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| ||| ||| | || || ||||| | || || || || || || ||||| Sbjct 354 AATTTTCGCTTTGACATTGTCGATGGTATCAGAGCTCTCAACTTCCAAAGTGATTGTTTT 295 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || ||||| |||||||| Sbjct 294 CCCAGTAAGAGTCTTGACAAAGATTTGCAT 265 >seq88321 Length=3664 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || |||||||||||| ||| | | ||||||| | || Sbjct 2498 ATGGAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGGGTGCGACCGTCTTCGAGCTG 2557 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || |||||| | |||| |||||| ||||| || || ||||||||||| ||||| Sbjct 2558 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGGATTTT 2617 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || | ||||| || ||| |||| || || | || ||||| || || || Sbjct 2618 GGCCTTGACGTTGTCTATTGTGTCGGAGCTTTCCACCTCGAGCGTGATGGTCTTCCCGGT 2677 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 |||||| || || || || |||||| Sbjct 2678 CAGAGTCTTGACGAAGATCTGCATA 2702 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || ||||| || ||||||||||| ||| | | |||| || | || Sbjct 2727 TGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 2786 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| |||||| |||||| || || ||||||||||| |||||| Sbjct 2787 TTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCTTCCTTGTCTTGGATTTTG 2846 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | ||||| ||||| |||| || || | || ||||| || || ||| Sbjct 2847 GCCTTGACGTTGTCTATTGTATCAGAGCTTTCCACCTCGAGCGTGATGGTCTTCCCGGTC 2906 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || ||||| Sbjct 2907 AGGGTCTTGACGAAGATCTGCAT 2929 >seq64485 Length=1617 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || | ||| || || || || ||||| |||||||||||| Sbjct 482 CCACCACGCAGACGGAGGACAAGATGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCC 423 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | || | || || | ||| || || ||| | ||||| ||||| ||||| ||| Sbjct 422 AGAGTCCTACCATCCTCGAGTTGCTTCCCTGCGAAAATCAACCGCTGCTGGTCTGGGGGA 363 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || ||| || | || || || || | | || || Sbjct 362 ATTCCTTCCTTGTCCTGTATCTTCGCTTTGACGTTATCAATCGTGTCAGAACTCTCCACT 303 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || || || || |||||||| ||||| Sbjct 302 TCCAAGGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 256 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || ||||| || ||||| ||||| ||| | || | || || Sbjct 237 AACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCCAGAGTCCTACCATCCTC 178 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||| ||||| | || | | ||| || || ||||| ||||||||||| Sbjct 177 TAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTG 118 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| ||| ||| | || || ||||| | || || || || || || || || Sbjct 117 AATTTTCGCTTTGACATTGTCGATGGTATCAGAGCTCTCCACTTCCAAAGTGATTGTCTT 58 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| |||||||| Sbjct 57 TCCAGTAAGGGTCTTGACAAAGATTTGCAT 28 >seq64482 Length=1502 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || | ||| || || || || ||||| |||||||||||| Sbjct 512 CCACCACGCAGACGGAGGACAAGATGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCT 453 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | || | || || | ||| || || ||| | ||||| ||||| ||||| ||| Sbjct 452 AGAGTCCTGCCATCCTCGAGTTGCTTCCCTGCGAAAATCAACCGCTGCTGGTCTGGGGGA 393 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || ||| || | || || || || | | || || Sbjct 392 ATTCCTTCCTTGTCCTGTATCTTCGCTTTGACGTTATCAATCGTGTCAGAACTCTCCACT 333 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || || || || |||||||| ||||| Sbjct 332 TCCAAGGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 286 >seq117102 Length=5212 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || || || |||||||| || ||| ||| | || || Sbjct 330 ACCAAGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTTCGGCCATCCTCA 389 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||||||||| ||| | ||||| | ||| || || ||||||||||||||||| Sbjct 390 AGTTGTTTGCCCGCGAAAATCAACCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 449 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| |||||| | || || || || | |||| || |||| |||||| || || Sbjct 450 ATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACCTCTAGGGTAATAGTCTTG 509 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| || ||||| Sbjct 510 CCGGTGAGGGTCTTCACAAATATCTGCAT 538 >seq167565 Length=877 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || |||||||||||| ||| | | ||||||| | || Sbjct 302 ATGGAGCGTCGACTCCTTCTGAATGTTGTAATCGGCGAGGGTGCGACCGTCTTCGAGCTG 361 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || |||||| | |||| |||||| ||||| || || ||||||||||| ||||| Sbjct 362 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGGATTTT 421 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || | ||||| ||||| |||| || || | || ||||| || || || Sbjct 422 GGCCTTGACGTTGTCTATTGTATCAGAGCTTTCCACCTCGAGCGTGATGGTCTTCCCGGT 481 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || || || || ||||| Sbjct 482 CAGGGTCTTGACGAAGATCTGCAT 505 >seq117103 Length=17306 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || || ||||| |||||||| || || | || | || || Sbjct 8733 ACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCTGCAAGCGTCCTGCCATCCTCA 8792 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| ||||| ||| | ||||| | ||| || || ||||||||||||||||| Sbjct 8793 AGTTGCTTGCCCGCGAAAATCAACCTCTGCTGATCTAGGGGAATTCCTTCCTTGTCCTGG 8852 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||||| | || || || || | |||| || || | |||||| || || Sbjct 8853 ATTTTTGCCTTTACGTTATCGATGGTGTCTGAACTTTCAACCTCGAGGGTAATAGTCTTG 8912 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| || ||||| Sbjct 8913 CCAGTGAGGGTCTTCACAAATATCTGCAT 8941 >seq107102 Length=7485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || || | |||||||| || ||| ||| | || || Sbjct 4659 ACCAAGTGGAGTGTTGATTCCTTCTAGATGTTGTAGTCCGCCAGAGTTCGGCCATCCTCA 4718 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| ||||| ||| | ||||| | ||| || || ||||||||||||||||| Sbjct 4719 AGTTGCTTGCCCGCGAAAATCAACCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 4778 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| |||||| | || || || || | |||| || |||| |||||| || || Sbjct 4779 ATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACCTCTAGGGTAATAGTCTTG 4838 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| || ||||| Sbjct 4839 CCGGTGAGGGTCTTCACAAATATCTGCAT 4867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356198529734285