Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq109320 179 6e-40 >seq109320 Length=8125 Score = 179 bits (198), Expect = 6e-40 Identities = 553/843 (66%), Gaps = 33/843 (4%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||||||||| |||| || || || ||||| | |||| ||||| Sbjct 2414 CTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAGATGAGCTCCATCCAGTCGAACGGGTT 2355 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | |||||| || ||| | | ||||| || | |||| || ||| || || || || Sbjct 2354 CGTCACGTCGTACACCTTGCCACAGCCGAGCGCGCCGAGCAGCCGGTCGGCGACGAACTC 2295 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCCG 159827 |||| | | | ||| | || | ||| ||||||| ||| | |||| ||||| || Sbjct 2294 GATGCACTTGCCGATCAGGTCGCTGTTCATCCCCACCAGGGCGCACGGC-AGCGCGTCGC 2236 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 | | |||||| ||| || ||||| || || ||| ||| | ||||| || | | Sbjct 2235 AGACGAACTCCCGCTCGATGTCGACGGCCTCCCGCACGATCCCCTTCACACGCTCCTCGC 2176 Query 159888 CCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 ||||||| | || | || | |||||||| || ||||||||||| || | Sbjct 2175 TCGGCTTGTTCCGCAGCAGCGAGT------AGAGGAGGCAGGCGAAGTCGCAGTGGAGGC 2122 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| || ||||||| |||||| || | | |||| |||||||||| || ||| | Sbjct 2121 CCTCGTCGCGGGAGATGAGCTCGTTCGAGAAGGTGAGCCCCGGCATGAGGCCCCGCTTCT 2062 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 ||||||| || |||| |||| |||| ||| || ||||||||||| ||| || || Sbjct 2061 TGAGCCAGAAGATGG-CGCAGAAGCTGCCGGAGAAGAAGATCCCCTCGACGCAGGCGAAG 2003 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 |||| ||| | ||| | || || | | ||| | |||| | |||||| || Sbjct 2002 GCCAGGAGGCGCTCCGCGAAGGACTCACCGCCGTC---GATCCAGCGGAGGGCCCAGTCG 1946 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTC 160183 ||||| |||| | ||| | | |||||||| || | | ||||| ||| Sbjct 1945 GCCTTGCGGGCGACGGCCGGGACGGTGTCGACGGCACGGAAGAGGCGGTCCTTCTCGGCG 1886 Query 160184 ACATCCTTGATCAGAGTAGCAATCAGCTTCGA----GTACATTTCTGCGTGCACATTTTC 160239 ||||||| |||| || | || |||||| || | ||| | || || Sbjct 1885 GAGTCCTTGA----CGTAGGTCTCCAGTAGGAGGCTGTACATCTCGGAGTGGATGTTCTC 1830 Query 160240 GATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC-AGATACTGCACCTCCTGTGTGA 160298 |||||| ||||| ||| |||||| |||||| ||| ||| ||||||| ||| Sbjct 1829 GATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCCGAGA-GCTGGACCTCCTTCATGA 1771 Query 160299 ACCTTTGAC--CCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACAC 160356 | | ||| | || || | || | ||||||| ||| || ||||| || | ||| Sbjct 1770 AGC--GGACGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCAC 1713 Query 160357 GTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTG 160416 ||| | || |||||| | |||||| | |||| | | |||||||| | ||| || Sbjct 1712 GTGGGTGACGAAATGGCGCTCGTCGGCGGTGAGGCCC---TCCCAGTGGCGGAGGTCCTG 1656 Query 160417 GGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCA 160476 || | || ||||| || ||| |||| || |||| || |||||||| |||| Sbjct 1655 GGAGAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTGCTTGTACATCTCCCA 1596 Query 160477 GAT 160479 ||| Sbjct 1595 GAT 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792431783500560