Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq73405 176 1e-39 >seq73405 Length=1727 Score = 176 bits (194), Expect = 1e-39 Identities = 242/336 (72%), Gaps = 8/336 (2%) Strand=Plus/Plus Query 42742 CGCTAACGTTGTACCGGTGATTCGACGGAGAGTGTGGATTGCTGAGCTTCTTTTTTGCTC 42801 ||||| |||| | || | |||||||| || ||| |||||| | | ||||| | Sbjct 1076 CGCTAGCGTT---CGGGCGTTTCGACGGTCAGGCTGGTTTGCTGCGACTGGATTTTGTCC 1132 Query 42802 TGATGGTGCTGCCAGGCACCGACGGACGAGTAGATAAAACGGCCAAAGAAGAAGATAAAG 42861 || ||||| | |||||| |||| ||| ||||| | ||| ||||||||||| || | ||| Sbjct 1133 TGGTGGTGATACCAGGCGCCGATGGAGGAGTAAACAAAGCGGCCAAAGAAAAACAGGAAG 1192 Query 42862 CTGATGAGCAGTACGATACGGGTCATGCGACTGTTAAATCGGTGTCGTTTTCGCATACTG 42921 ||||||||||||| ||| |||||||| || ||||||||||||||||||| |||||| Sbjct 1193 CTGATGAGCAGTATGATGCGGGTCATCCGGGTGTTAAATCGGTGTCGTTTGTGCATACGC 1252 Query 42922 GTTGCCTGACTCACAAAAGGTTCCTTGAAGTATGTCCCAAGCTGTGGACGGTACTTGCAT 42981 || ||||||||||| || | || | || || | || || | | || Sbjct 1253 GTGGCCTGACTCACTGTGTTTTTCCTG-GGCATACCC----TTCCGGGCGATGCGGATAT 1307 Query 42982 TAAGGCACAACAGGACAAAATGGTCAATTCTTCGTTATGTAAAAAAGCGTCAGTGGATAC 43041 ||||||||| | ||| ||| |||||||||| || | |||||| || ||||| || ||| Sbjct 1308 TAAGGCACAGCGGGAAGAAAGGGTCAATTCTGCGATGTGTAAATAACCGTCAATGTTTAC 1367 Query 43042 ATATTTTAATGTTATGGAAGTTAATTTAATTATTTA 43077 || || ||||||| || |||| || |||||| Sbjct 1368 ATTAATTCATGTTATTAAAAATAATATATCTATTTA 1403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142721302947652