Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq109320 246 6e-60 >seq109320 Length=8125 Score = 246 bits (272), Expect = 6e-60 Identities = 578/864 (67%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | ||||| |||||||| |||||||||| || ||||||| ||| Sbjct 2432 CTGGTACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAGATGAGCTC 2373 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| || ||| ||||| | || |||||| || || ||| | | | |||| Sbjct 2372 CATCCAGTCGAACGGGTTCGTCACGTCGTACACCT-TGCCACAGCCGAGCGCGCCGAGCA 2314 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| |||||||| | || || ||| | ||||||| || | |||| Sbjct 2313 GCCGGTCGGCGACGAACTCGATGCACTTGCCGATCAGGTCGCTGTTCATCCCCACCAGGG 2254 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| || || | || |||||| ||| || | ||||| |||| ||| ||| Sbjct 2253 CGCACGG-CAGCGCGTCGCAGACGAACTCCCGCTCGATGTCGACGGCCTCCCGCACGATC 2195 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 ||| || || ||| || ||||| ||||| || | ||||| | |||||| Sbjct 2194 CCCTTCACACGCTCCTCGCTCGGCTTGTTCCGCAGCAGCGAG---TAGAGGAGGCAGGCG 2138 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | ||| | ||| ||||| ||| ||||||| |||| |||||| ||| || ||| Sbjct 2137 AAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTCGAGAAGGTGAGCCCCGGC 2078 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| |||| || ||||||||||| || || ||| ||| ||||||||||| ||| Sbjct 2077 ATGAGGCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAGATCCCC 2018 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 || || ||||| || ||| | ||| |||| || | ||| ||||||| Sbjct 2017 TCGACGCAGGCGAAGGCCAGGAGGCGCTCCGCGAAGGACTCACCGCCGTC---GATCCAG 1961 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA-- 48374 || |||||||| ||||| || | || | || || | ||| ||||||| Sbjct 1960 CGGAGGGCCCAGTCGGCCTTGCGGGCGACGGCCGGGACGGTGTCGACGGCACGGAAGAGG 1901 Query 48375 -GCTTCTTGCACTCACCTGCGTCCGCAACATAGGT----AGTGAGCAGCTTTGCGTACAT 48429 | | ||| ||| | | |||| || ||||| ||| | ||| |||||| Sbjct 1900 CGGTCCTT---CTCGGCGGAGTCCTTGACGTAGGTCTCCAGTAGGAGGCT----GTACAT 1848 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || ||||||||||| ||||||||||| | |||||| | | Sbjct 1847 CTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTCCGAGAG 1788 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 ||| || || | ||| | | || ||||| ||| || || || || || || Sbjct 1787 CTGGACCTCCTTCATGAAGCGGACGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGC 1728 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 |||||||| || || || | | |||||||||||||| | |||||| | | |||| Sbjct 1727 GAAGAAGGCGAGCACGTGGGTGACGAAATGGCGCTCGTCGGCGGTGAGGCCCTCCCAGTG 1668 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTT 48669 | | ||| | | ||||| || || || | ||||||||||| || || | || Sbjct 1667 GCGGAGGTCCTGGGAGAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTGCTT 1608 Query 48670 GTACATGCCCCATATGTCCGGATA 48693 |||||| |||| || | ||| || Sbjct 1607 GTACATCTCCCAGATCTGCGGGTA 1584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928342288515840