Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq109320 185 2e-41 >seq109320 Length=8125 Score = 185 bits (204), Expect = 2e-41 Identities = 550/848 (65%), Gaps = 12/848 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||| |||| | ||| |||||||||||| ||| | || || Sbjct 1593 ATCTGGGAGATGTACAAGCAGGCGGAGGCCTCCTTCTGGACCGCCGAGGAGGTCGACCTC 1652 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || ||||| | | |||| | | || || ||||||| ||||| ||| || Sbjct 1653 TCCCAGGACCTCCGCCACTGGGAGGGCCTCACCGCCGACGAGCGCCATTTCGTCACCCAC 1712 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| || ||||| || || || || |||||| || || | ||| Sbjct 1713 GTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGTCCGCTTC 1772 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 | | ||| || ||| | ||||||| |||||||| |||||||| |||||||| Sbjct 1773 ATGAAGGAGGTCCAGCTCTCGGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAG 1832 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGAG 25776 || | ||||| ||| |||| | || ||| ||| ||| | | ||| ||||||| Sbjct 1833 AACATCCACTCCGAGATGTACAGCCTCCTACTGGAGACCTACGTCAAGGACTCCGCCGAG 1892 Query 25777 AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAG-CATCAAGAGGAAGGCGCGGTG 25835 | || || || || ||||| |||| ||| ||| | | || | ||||| || Sbjct 1893 AAGGACCGCCTCTTCCGTGCCGTCGA-CACCGTCCCGGCCGTCGCCCGCAAGGCCGACTG 1951 Query 25836 GGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG- 25894 |||| | |||||| || || | | | || | ||||| || | ||||| | Sbjct 1952 GGCCCTCCGCTGGATCGACGGC---GGTGAGTCCTTCGCGGAGCGCCTCCTGGCCTTCGC 2008 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 |||| || ||||| ||||| ||| ||| | | ||| |||||||||||||||||| || Sbjct 2009 CTGC-GTCGAGGGGATCTTCTTCTCCGGCAGCTTCTGC-GCCATCTTCTGGCTCAAGAAG 2066 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 ||| |||||| ||||| ||| || |||||||||||| | | |||||||| ||| Sbjct 2067 CGGGGCCTCATGCCGGGGCTCACCTTCTCGAACGAGCTCATCTCCCGCGACGAGGGCCTC 2126 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 ||| | || || |||||||| |||||| || | ||| |||| || | ||| Sbjct 2127 CACTGCGACTTCGCCTGCCTCCTCTACTCG---CTGCTGCGGAACAAGCCGAGCGAGGAG 2183 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 || | | ||| | ||||| || || |||||| |||||| Sbjct 2184 CGTGTGAAGGGGATCGTGCGGGAGGCCGTCGACATCGAGCGGGAGTTCGTCTGCGACGCG 2243 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193 |||| ||||||| | || || || | | ||| |||| || Sbjct 2244 CTGCCGTGCGCCCTGGTGGGGATGAACAGCGACCTGATCGGCAAGTGCATCGAGTTCGTC 2303 Query 26194 GCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTC 26253 ||||||| ||||| || ||| || | || | ||| | | ||||||||| Sbjct 2304 GCCGACCGGCTGCTCGGCGCGCTCGGCTGTGGCAAGGTGTACGACGTGACGAACCCGTTC 2363 Query 26254 GACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGC 26313 |||| ||||| ||| ||| || | ||||||||||||||||| || ||| ||||||| Sbjct 2364 GACTGGATGGAGCTCATCTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGGGTCGGG 2423 Query 26314 GACTATCA 26321 || || || Sbjct 2424 GAGTACCA 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925663494949440