Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq236471 86.0 1e-11 seq209032 86.0 1e-11 seq199606 86.0 1e-11 seq189363 86.0 1e-11 seq161016 86.0 1e-11 seq137838 86.0 1e-11 seq137760 86.0 1e-11 seq129214 86.0 1e-11 seq68690 86.0 1e-11 >seq236471 Length=824 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 202 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 144 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 143 CCCCGTCAGTCC 132 >seq209032 Length=712 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 544 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 602 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 603 CCCCGTCAGTCC 614 >seq199606 Length=856 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 773 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 831 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 832 CCCCGTCAGTCC 843 >seq189363 Length=1060 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 330 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 272 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 271 CCCCGTCAGTCC 260 >seq161016 Length=991 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 840 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 898 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 899 CCCCGTCAGTCC 910 >seq137838 Length=1150 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 980 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 1038 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 1039 CCCCGTCAGTCC 1050 >seq137760 Length=1697 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 194 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 136 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 135 CCCCGTCAGTCC 124 >seq129214 Length=1148 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 417 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 359 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 358 CCCCGTCAGTCC 347 >seq68690 Length=1910 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 373 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 315 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 314 CCCCGTCAGTCC 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 774968600679600