Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq107102 86.0 9e-12 >seq107102 Length=7485 Score = 86.0 bits (94), Expect = 9e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || |||| || || || || || | || || ||| ||| Sbjct 3956 AATGCAGATTTTTGTCAAGACTCTGACCGGTAAGACCATCACTCTGGAGGTGGAAAGTTC 3897 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || || ||||| || || || ||||| || ||||| ||||| || || Sbjct 3896 AGACACCATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCA 3837 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || |||||| |||||| ||||| || |||||| || || | | |||||||| Sbjct 3836 GCAGAGGCTGATTTTTGCCGGGAAGCAACTGGAAGATGGGAGGACACTGGCCGATTATAA 3777 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 ||| |||||| |||| || || ||||| Sbjct 3776 TATTCAGAAAGAGTCGACTCTGCACTTAGT 3747 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || || || || ||||| || || Sbjct 4183 ATGCAGATTTTTGTCAAGACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAGAGCTCG 4124 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| ||| ||||| || ||||||||||| || ||||| || Sbjct 4123 GATACCATTGATAATGTCAAAGCTAAGATACAGGACAAAGAAGGCATTCCCCCAGATCAG 4064 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||||| ||||| ||||| || || ||| Sbjct 4063 CAGAGGTTGATTTTCGCCGGGAAGCAACTTGAGGAT 4028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729365329251600