Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq254724 93.3 2e-14 seq254723 93.3 2e-14 seq84333 80.6 1e-10 >seq254724 Length=996 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 766 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 825 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 826 CTGCTCTACCCCGC 839 >seq254723 Length=915 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 820 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 879 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 880 CTGCTCTACCCCGC 893 >seq84333 Length=22952 Score = 80.6 bits (88), Expect = 1e-10 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| |||||||||||| | | |||| ||| ||||||||| |||||||||| | Sbjct 8705 GTTGCGGAGATGGGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 8646 Query 50170 CTGCTCTAC 50178 ||||||||| Sbjct 8645 CTGCTCTAC 8637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181012306431462