Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq115376 84.2 2e-11 seq112091 84.2 2e-11 seq109227 82.4 7e-11 seq107869 82.4 7e-11 >seq115376 Length=10371 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| |||||||||||| || || | |||||| || |||||||| | | Sbjct 7860 GATTCCTTTTGGATGTTGTAGTCGGCCAATGTCCTGCCATCTTCAAGTTGTTTACCAGCA 7801 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | || || || ||||| || || ||||| || |||||| |||| Sbjct 7800 AAGATCAGCCTTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAATTTTAGCCTTCACA 7741 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || |||||||| | || || || | || | ||| || ||||| ||||| || Sbjct 7740 TTGTCGACAGTATCAGAGCTTTCGACCTCAAGAGTAATCGTCTTCCCAGTAAGAGTCTTC 7681 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 7680 ACGAAAATCTGCAT 7667 >seq112091 Length=14418 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| |||||||||||| || || | |||||| || |||||||| | | Sbjct 11826 GATTCCTTTTGGATGTTGTAGTCGGCCAATGTCCTGCCATCTTCAAGTTGTTTACCAGCA 11885 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | || || || ||||| || || ||||| || |||||| |||| Sbjct 11886 AAGATCAGCCTTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAATTTTAGCCTTCACA 11945 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || |||||||| | || || || | || | ||| || ||||| ||||| || Sbjct 11946 TTGTCGACAGTATCAGAGCTTTCGACCTCAAGAGTAATCGTCTTCCCAGTAAGAGTCTTC 12005 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 12006 ACGAAAATCTGCAT 12019 >seq109227 Length=9452 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| || || |||||||| || |||| Sbjct 5574 GACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCG 5633 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || ||||| || || || || || |||| Sbjct 5634 AAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 5693 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| ||| ||| || |||| || | ||| || || ||||| || || Sbjct 5694 TTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTTATCGTCTTCCCCGTCAGGGTCTTC 5753 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 5754 ACGAAGATCTGCATGGCT 5771 >seq107869 Length=8698 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| ||| | ||| || ||||||||||| || || | Sbjct 7738 GACTCCTTCTGAATGTTGTAATCGGCGAGGGTGCGACCGTCTTCGAGCTGCTTTCCAGCG 7797 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || || || |||||||| || || || || || | Sbjct 7798 AAGATCAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGACG 7857 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| |||||| |||| ||| | ||| || || ||||| || || Sbjct 7858 TTGTCGATGGTGTCGGAGCTCTCCACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTC 7917 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 7918 ACGAAGATCTGCATGCCT 7935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474978800682360