Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq100951 89.7 5e-13 >seq100951 Length=7960 Score = 89.7 bits (98), Expect = 5e-13 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 34600 CCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGG 34659 ||||||| | ||||| || || || |||| |||| || || | ||||| || || | Sbjct 6800 CCTCTGC-AGTTCTATGTTGCAAACAGGGAATTGTCATGTCAAATGTATCAGCGCTCTGC 6858 Query 34660 AGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGAT 34719 |||||||| || || ||||| |||||||||||| ||| ||||| || || | |||||| Sbjct 6859 TGACATGGGATTGGGAGTGCCATTCAACATTGCTTCTTATGCTCTCCTTACATGCATGAT 6918 Query 34720 CGCTCATGT 34728 |||||||| Sbjct 6919 TGCTCATGT 6927 Score = 89.7 bits (98), Expect = 5e-13 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||| |||||| | || || ||||| ||| |||||||||||| ||||| || || Sbjct 6927 ACATGAGCAATCATGCATGTAAGGAGAGCATAAGAAGCAATGTTGAATGGCACTCCCAAT 6868 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | || || ||||| | || || |||| |||| || || || ||||| Sbjct 6867 CCCATGTCAGCAGAGCGCTGATACATTTGACATGACAATTCCCTGTTTGCAACATAGAAC 6808 Query 6737 TGGCAGAGG 6745 | ||||||| Sbjct 6807 T-GCAGAGG 6800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446727095676720