Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq123577 113 6e-20 >seq123577 Length=33807 Score = 113 bits (124), Expect = 6e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 ||| || ||||||| ||| | || || | |||| | |||| ||||||||||| ||| || Sbjct 24807 ACCCCCTTGATCTACATAACGAGCTGTATCATTAAATACTCGCAACATTGGAACAATGCC 24866 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 || || ||||||||||| ||| || ||||| ||| | || || |||||| || || Sbjct 24867 ATTGGAAGTTCCATTTGTCCCACGTATGTAACTACCAGTGGCACGGATATTATGAACAGA 24926 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 || || || ||||| ||| || || | ||| || |||||| ||||| || || Sbjct 24927 TACACCAATCCCTCCAGCCGATTTGCTGATAACAGCACACTCTTTCAAGGTATCATATAT 24986 Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| ||||| || || ||||| | ||| || ||||| Sbjct 24987 GCCCTCAATACTATCTTCTTTCATGCACACAAGGAAGCAGCT 25028 Score = 105 bits (116), Expect = 9e-18 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||||||||||| || ||| | | ||||||||| || ||||||||||| ||||||| Sbjct 24285 CTCTCTTTCATAGTGCAAATACAACTTTTCAAATTCTTCACCCCAAACATCTGCCAATCC 24344 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAA 78015 || ||||| |||| || | | |||||||| |||| | | || ||| | |||||| | Sbjct 24345 TGGAGATTCACTTGGACAGAAAAGTGACCAGTGCCCAT-TACTTTGAACCCTTTTCATGA 24403 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 | |||||||| | ||| || ||| ||| ||||| || | | ||| ||||| Sbjct 24404 ATAGATCAGGCACCCAAAGGGCATAAAACAGATCCCGAGCACGATGCTCTTC 24455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692289550676640