Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq123577 140 5e-28 >seq123577 Length=33807 Score = 140 bits (154), Expect = 5e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| || ||||||| ||| | || || | |||| | |||| ||||||||||| |||||| Sbjct 24807 ACCCCCTTGATCTACATAACGAGCTGTATCATTAAATACTCGCAACATTGGAACAATGCC 24866 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || || || |||||||| ||| || ||||| ||| ||||| |||||| || ||| Sbjct 24867 ATTGGAAGTTCCATTTGTCCCACGTATGTAACTACCAGTGGCACGGATATTATGAACAGA 24926 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 || || || ||||| ||| ||| ||| | |||||| |||||| || ||||| || Sbjct 24927 TACACCAATCCCTCCAGCCGATTTGCTGATAACAGCACACTCTTTCAAGGTATCATATAT 24986 Query 76933 GCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 |||||| |||||||| || ||||| | ||| || ||||| Sbjct 24987 GCCCTCAATACTATCTTCTTTCATGCACACAAGGAAGCAGCT 25028 Score = 105 bits (116), Expect = 1e-17 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||||||||||| || ||| ||| ||||||||| || ||||||||||| |||| || Sbjct 24285 CTCTCTTTCATAGTGCAAATACAACTTTTCAAATTCTTCACCCCAAACATCTGCCAATCC 24344 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-AACCCGTTTCATAA 76610 ||| ||||| | ||||| | | |||||| | |||| | | || ||||| |||||| | Sbjct 24345 TGGAGATTCACTTGGACAGAAAAGTGACCAGTGCCCAT-TACTTTGAACCCTTTTCATGA 24403 Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 | |||||||| | ||| || ||| ||| ||||| || Sbjct 24404 ATAGATCAGGCACCCAAAGGGCATAAAACAGATCCCG 24440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710492590768320