Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq130020 284 1e-71 seq142966 262 4e-65 >seq130020 Length=1009 Score = 284 bits (314), Expect = 1e-71 Identities = 217/256 (85%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 8356 GCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTC 8415 ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct 1009 GCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTC 950 Query 8416 AAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGC 8475 ||| |||||| ||||||||| ||| |||||||||||| |||||| ||||||||| Sbjct 949 AAGTGATTCTCTTGCCTCAGCTTCCCGAGTAGCTGGGACTACAGGTGCGCACCACCACGC 890 Query 8476 CAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCT 8535 | ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct 889 CCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACAGTGTTGGCCAGGATGGTCT 830 Query 8536 CGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG 8595 | | ||| ||||||| ||||| || |||| |||||||||||||||||||||||| Sbjct 829 CAATCTCTTGACCTC--TTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAT 772 Query 8596 CATGAGCCACCGCGCC 8611 |||||||||| | ||| Sbjct 771 CATGAGCCACTGTGCC 756 >seq142966 Length=1228 Score = 262 bits (290), Expect = 4e-65 Identities = 200/234 (85%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 8379 TGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCT 8438 |||||| ||||||||||||||| ||||||| ||||||||| || ||||||||||||||| Sbjct 1027 TGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATCCTCCTGCCTCAGCCT 968 Query 8439 CCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAA-TTTTTGTATTTTTA 8497 || |||||||||||||||||| ||||||||||| ||||| |||||||||| ||| Sbjct 967 CCCAAGTAGCTGGGATTACAGGTGCCTGCCACCACGCCTGGCTAATTTTTTGTATTCTTA 908 Query 8498 GTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGAT 8557 ||| ||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||| Sbjct 907 GTAAAGACGGGGTTTCACTATGTTGGCCAGAGTGGTCTCTAACTCCTGACCTC--GTGAT 850 Query 8558 CCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCC 8611 | | ||| |||||||||||||||||| ||||||||| |||||||||||||| Sbjct 849 CTGCTCACCTTGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCGCGCC 796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519701897081400