Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 2e-12 >seq9 Length=39018107 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 17249 AGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT 17308 || ||||||||||| |||||||| |||||||| ||||| ||||| || ||||| ||| Sbjct 26348168 AGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCG 26348227 Query 17309 CGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATG 17368 ||||| |||| | || || ||| ||| || | || || || ||| |||||| Sbjct 26348228 CGGGCCTCCGAGAGCTGGACCTCCTTCATGAAGCGGACGGCGAGGTTCTCGAGGACGATG 26348287 Query 17369 CCGTCGCTCGCGGCGAAAAACGC 17391 |||||| |||||||| || || Sbjct 26348288 CCGTCGGAGGCGGCGAAGAAGGC 26348310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517513570396680