Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 >seq6 Length=53892272 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || || | |||||| || ||||| ||||| |||||||||||||| Sbjct 43309958 TCCACCACGGAGACGGAGGACAAGGTGAAGGGTCGATTCCTTTTGGATGTTGTAGTCGGC 43309899 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCC 18212 || ||| | | |||||| | |||||| || ||| |||| || ||||| || ||| Sbjct 43309898 CAATGTCCTGCCATCTTCAAGTTGTTTACCAGCAAAGATCAGCCTTTGCTGGTCC 43309844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379321110264495