Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 >seq1 Length=40297282 Score = 132 bits (146), Expect = 1e-25 Identities = 383/574 (67%), Gaps = 19/574 (3%) Strand=Plus/Minus Query 35147 AAGGACGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCT 35206 ||||| || || |||||||| || || |||| | ||||| || ||| |||| | Sbjct 21354034 AAGGATGACAGGACTGGAACTGGTACCATATCAAAGTTTGGGTGTCAGATGCGGTTTAAT 21353975 Query 35207 CTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG 35266 || || | | ||| | || || | || || |||||| | || ||| | |||||||| Sbjct 21353974 CTGCGCAA--AAACT-TCCCTCTTTTGACAACTAAGAAAGTATTTTGGCGTGGAGTTGTT 21353918 Query 35267 GAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAG 35326 |||||||| ||||||||| || || |||| | ||||| ||| || ||| ||| Sbjct 21353917 GAAGAACTTCTGTGGTTCATAAGTGGTTCTACAAATGCCAAG--ATTCTTCAGGAAAAAG 21353860 Query 35327 --ATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAG--TAGAGGGTTATA 35382 || || || ||| | | |||| || | || | | || | | || | | | Sbjct 21353859 GCATTCATATATGGGATGGCAATGCATCTAGAGACTACCTTTACGGGCTTGATC-TGAGA 21353801 Query 35383 CGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGC 35442 ||| ||| ||| || || |||||||| || || || || || ||||| ||||||||||| Sbjct 21353800 -GATCGAGAAGAAGGTGACTTGGGACCGGTTTATGGTTTTCAGTGGCGGCATTTTGGTGC 21353742 Query 35443 TGAATATGATACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT- 35500 | ||| || | | | | | || |||||||| | || ||||||| ||| || Sbjct 21353741 TAGGTATAGTA-ATATGCATGCTGACTATACTGGCCAAGGATTTGATCAGTTGTTGGATG 21353683 Query 35501 ATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAAT 35560 || | | | | ||| | ||||||||| || | | || || | | || |||||| Sbjct 21353682 TTATTTACAAGATTAAGA-ATAATCCAGATTATCGTCGAATTATACTCTCTGCTTGGAAT 21353624 Query 35561 CCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTG 35620 ||| ||| | | | ||||| ||||| || ||||||||| ||| || || ||||| Sbjct 21353623 CCTTCTGATTTGAAATTGATGGCGCTTCCACCTTGCCACATGTTTGCACAGTTCTATGTT 21353564 Query 35621 GCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCG 35678 || || | |||||||| || || |||||||||| || || ||| || ||||| | Sbjct 21353563 GCAAACAGGGAATTGTCATGTCAAATGTATCAGCGCTCTGCTGACATG--GGATTGGGAG 21353506 Query 35679 TGCCCTTCAATATTGCATCATACTCTCTTCTGAC 35712 |||| ||||| |||| || || |||| || || Sbjct 21353505 TGCCATTCAACGTTGCTTCTTATGCTCTCCTTAC 21353472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989521226048205