Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8 116 5e-21 >seq8 Length=74329289 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 || || ||||||| || | ||| || | |||| | |||| |||||| |||| ||| ||| Sbjct 69479665 CCCCCTTGATCTACATAACGAGCTGTATCATTAAATACTCGCAACATCGGAACAATGCCA 69479724 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 |||||||| ||||| ||||| || || || ||| | ||||| |||||| || ||| Sbjct 69479725 TTGGATGTTCCATTCGTCCCACGTATGTAACTACCAGTGGCACGGATATTATGAACAGAT 69479784 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | ||| || || || || ||| ||| | || || ||| || |||||||| ||| Sbjct 69479785 ACACCAATCCCTCCAGCTGATTTGCTGATAACAGCACACTCTTTCAAGGTATCATATATG 69479844 Query 66396 CCCTCTATACTATCATCCATCATG 66419 ||||| |||||||| || ||||| Sbjct 69479845 CCCTCAATACTATCTTCTTTCATG 69479868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658132067330840