Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 116 5e-21 >seq8 Length=74329289 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || || ||||||| || | ||| || | |||| | |||| |||||| |||| ||| ||| Sbjct 69479665 CCCCCTTGATCTACATAACGAGCTGTATCATTAAATACTCGCAACATCGGAACAATGCCA 69479724 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 |||||||| ||||| ||||| || || || ||| ||||||| |||||| || ||| Sbjct 69479725 TTGGATGTTCCATTCGTCCCACGTATGTAACTACCAGTGGCACGGATATTATGAACAGAT 69479784 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 | ||| || || || || ||| ||| | || || ||| || |||||||| ||| Sbjct 69479785 ACACCAATCCCTCCAGCTGATTTGCTGATAACAGCACACTCTTTCAAGGTATCATATATG 69479844 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 ||||| || ||||| || ||||| Sbjct 69479845 CCCTCAATACTATCTTCTTTCATG 69479868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718224348139640