Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq2340 93.3 8e-15 >seq2340 Length=6312 Score = 93.3 bits (102), Expect = 8e-15 Identities = 202/297 (68%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 10428 TATCGACCTGAACCAGCTACCCGCACCGGATGTGGTCGAGGAGCTGGACTTTGAAACCAT 10487 ||||||||| | ||||| ||||| ||| | ||||||||| || | ||||| ||| || Sbjct 1662 TATCGACCTCAGTCAGCTGCCCGCGCCGCAGGTGGTCGAGCAGATCGACTTCGAACAGAT 1603 Query 10488 TCTCGCCGAACGCAAGGCG-ACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGG 10546 |||||||| |||||||| | | | | ||| | || | || |||||| | | Sbjct 1602 CCTCGCCGAGCGCAAGGCTTATGCCG-TCAGCCTATGGCCTGCGGATGAGCAGGCCGAGA 1544 Query 10547 TCGCCCGTAC-CCTGACGCTGGAATCTGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCT 10605 ||||| | || ||| |||||| || ||||| || ||| ||||| |||| || || Sbjct 1543 TCGCC-GCACGCCTTGAGCTGGAGTCGGAGCCCATCACCAAGTTGCTGCAGGAGAACGCC 1485 Query 10606 TATCGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGGCC 10665 || || || | ||| ||||||||| || || || || | | ||||||||||| | Sbjct 1484 TACCGGGAAATGATCCTGCGTCAGCGGGTCAACGAAGCGTCGCTCGCGGTGATGCTCAGC 1425 Query 10666 TGTGCAGCCGGTAATGACCTTGATGTGATTGGTGCCAATTACAACACCACGCGCCTG 10722 | || | || || ||||| || | | | | ||| | |||| || ||||||| Sbjct 1424 TCGGCCGGCGACAACGACCTGGACCAGGTCGCGGGCAACTTCAACGTCAAGCGCCTG 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98202226044780